ggKbase home page

ACD20_46_11

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(10497..11759)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 382.0
  • Bit_score: 146
  • Evalue 1.70e-32
Carbohydrate-selective porin n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXW2_9PROT (db=UNIREF evalue=8.0e-30 bit_score=135.0 identity=31.19 coverage=68.646080760095) similarity UNIREF
DB: UNIREF
  • Identity: 31.19
  • Coverage: 68.65
  • Bit_score: 135
  • Evalue 8.00e-30
seg (db=Seg db_id=seg from=259 to=273) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

extracellular membrane kelly wrighton (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1263
ATGATTATTAAATATCTTAAATTTCTGACTATCCTGCTTTTTATATCAGGAATATTGAGTAATTCTGCCTGTTTAGCAGATGAAAGTCTGCTGGAAGAAATTGTATTTGAGAAAAGCCAGAACCAAGAAGATAAACTAACGGAAAATCATTATATTGAAACCAGTTACATTGATAATAAGATTAAATTATACAAATATCTTGAAATGCACGGTATTATACCGGAAATAAACTATACAACAGATAGCTTTTTAAAACTCAGAGGCAAGGATATCAGTCAGAATATCAAATCTATAGGACTATTAAATTATTCTGTCACAGTTGATACAGAAAAACTGGGTTTAATTCCGGGCGGCACGGCATATGTACTAGGGCAAAATTTACATGCTTTTGAATTATCTCCTGATTTTGTGGGAGATCTACAGGGAATAAGCAGTATTGATGGACCGGTAATGAATCAGCTTGGTGAAGCTTGGTATCAACAGCGTTTAATTGATGATAAAGTTAGCGTTAAAGCTGGAAAACAAGATGCAAATACTGACTTTGATGCTTTAGAAACAAGTGTTGATTTTATTAATTCATCATTTACTACAATAGCTAATATCCCAATGCCAACATATCCTGATCAAAGATTTGGCGGGGCTATTTTAATTGAGCCAATAGAGCAATTCAACCTGAAAACAGGCGTATATAATGGAGTAGCAGAGCAGGAAGATATAGGATTTAGAATTGGCAGAGAAGGTGTTTTTACTATAGTTGAATCGGGAATAAGGCCAAATATAAATAACCATTATGGAAACTACATAATTGGATATTGGTATGCTTCTAAAAATATTGAAGAAATTCCATTAAATAATAATGCAAGAGTATTTTCCGGCAATTATGGAGTATACGCAGGCCTTGAACAGCAAATTTACAAAGAGAATAATGAAGACGAGCAAGGTTTATATATACAAGGTCAATATGGCTGGAGTCCATCGAATAGAAATGAAATCGCAAGATTTTACAGTGCAAGCTGCGCATATTATGGCCTGATTCCAAAGAGAGATAATGATGTATTGGGCTTTGGCACTGCGATTGCGAATTTGAGCAGTAGGATTAAAAATATTGAAAATAAAAAAGATGAAATCGTACTGGAAGGTTTTTATAAAGTAGAAATAACTCCCTGGCTTGCCCTTGAGCCAGATATGCAATATATATTTAATCCTGATGGAAATAATAAAAATGCGTTTATAATAGGAGTTAGAACGTTAATTAGTTTTTAG
PROTEIN sequence
Length: 421
MIIKYLKFLTILLFISGILSNSACLADESLLEEIVFEKSQNQEDKLTENHYIETSYIDNKIKLYKYLEMHGIIPEINYTTDSFLKLRGKDISQNIKSIGLLNYSVTVDTEKLGLIPGGTAYVLGQNLHAFELSPDFVGDLQGISSIDGPVMNQLGEAWYQQRLIDDKVSVKAGKQDANTDFDALETSVDFINSSFTTIANIPMPTYPDQRFGGAILIEPIEQFNLKTGVYNGVAEQEDIGFRIGREGVFTIVESGIRPNINNHYGNYIIGYWYASKNIEEIPLNNNARVFSGNYGVYAGLEQQIYKENNEDEQGLYIQGQYGWSPSNRNEIARFYSASCAYYGLIPKRDNDVLGFGTAIANLSSRIKNIENKKDEIVLEGFYKVEITPWLALEPDMQYIFNPDGNNKNAFIIGVRTLISF*