Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
DNA-directed RNA polymerase, beta'''' subunit | rbh |
KEGG
DB: KEGG |
47.0 | 999.99 | 1050 | 0.0 | plp:Ple7327_4006 |
DNA-directed RNA polymerase, beta'''' subunit | similarity |
KEGG
DB: KEGG |
47.0 | 999.99 | 1050 | 0.0 | plp:Ple7327_4006 |
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acaryochloris marina MBIC11017 RepID=RPOC2_ACAM1 (db=UNIREF evalue=0.0 bit_score=1046.0 identity=47.13 coverage=94.7286821705426) | similarity |
UNIREF
DB: UNIREF |
47.13 | 94.73 | 1046 | 0.0 | plp:Ple7327_4006 |
seg (db=Seg db_id=seg from=277 to=290) | iprscan |
interpro
DB: Seg |
null | null | null | null | plp:Ple7327_4006 |
seg (db=Seg db_id=seg from=1037 to=1054) | iprscan |
interpro
DB: Seg |
null | null | null | null | plp:Ple7327_4006 |
seg (db=Seg db_id=seg from=746 to=761) | iprscan |
interpro
DB: Seg |
null | null | null | null | plp:Ple7327_4006 |
coiled-coil (db=Coil db_id=coil from=78 to=99 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | plp:Ple7327_4006 |
rpoC2_cyan: DNA-directed RNA polymerase, b (db=HMMTigr db_id=TIGR02388 from=14 to=1248 evalue=0.0 interpro_id=IPR012756 interpro_description=DNA-directed RNA polymerase, subunit beta'' GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | plp:Ple7327_4006 |
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=9 to=1264 evalue=3.9e-245) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.90e-245 | plp:Ple7327_4006 |
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=9 to=1264 evalue=3.9e-245) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.90e-245 | plp:Ple7327_4006 |
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=2 to=1270 evalue=1.5e-201) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.50e-201 | plp:Ple7327_4006 |
RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=175 to=607 evalue=3.9e-50 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-50 | plp:Ple7327_4006 |
RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=1017 to=1201 evalue=1.4e-20 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-20 | plp:Ple7327_4006 |
RNA_pol_Rpb1_4 (db=HMMPfam db_id=PF05000 from=97 to=162 evalue=2.6e-14 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.60e-14 | plp:Ple7327_4006 |
RNA_pol_Rpb1_3 (db=HMMPfam db_id=PF04983 from=17 to=68 evalue=8.2e-08 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.20e-08 | plp:Ple7327_4006 |
Rudiment single hybrid motif (db=superfamily db_id=SSF51246 from=372 to=426 evalue=0.00012 interpro_id=IPR011054 interpro_description=Rudiment single hybrid motif) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.20e-04 | plp:Ple7327_4006 |
RNApol_bact_RpoC2 (db=HAMAP db_id=MF_01324 from=12 to=1275 evalue=10.508 interpro_id=IPR012756 interpro_description=DNA-directed RNA polymerase, subunit beta'' GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 1.05e+01 | plp:Ple7327_4006 |
amr:AM1_3594 rpoC2; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=ACD20_26279.54254.14G0024,ACD20_26279.54254.14_24,ACD20_C00048G00024 id=19102 tax=ACD20 species=Acaryochloris marina genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 2481 | 0.0 | plp:Ple7327_4006 |
Uncharacterized protein {ECO:0000313|EMBL:EKE03747.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2481 | 0.0 | K2E2Q7_9BACT |