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ACD20_66_18

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(15857..16411)

Top 3 Functional Annotations

Value Algorithm Source
putative dTDP-4-deoxyrhamnose 3,5 epimerase similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 184.0
  • Bit_score: 289
  • Evalue 5.50e-76
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=4 to=179 evalue=2.4e-111 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-111
RmlC-like cupins (db=superfamily db_id=SSF51182 from=3 to=182 evalue=4.4e-77 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-77

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCATTTGAGTTTAAAAAACTGGAAATACCAGAAATAATCCTTGTCACTCCAAGAGTTTTTGGAGATGACAGAGGATTTTTTATGGAGACATATAAAAAATCAGAATTTGCTAAAAATGGTATTACAGAAGAATTTGTACAGGATAATCATTCTAAATCTTCAAAAGGCGTTTTAAGAGGTCTTCATTATCAAAAAAATCCTAAGGCTCAGGGAAAACTTATCAGGTGCACTAAAGGTGAGATTTTTGATGTTGGAGTTGACATCAGAAAAGGATCACCGACTTTTGGCAAATGGTGCAGAGTTGTTTTGTCTGAGCAAAATAGACAAATGCTCTATGTACCTGCAGGGTTTGCCCATGGTTTTCTTGTATTAAGTGATGAAGCTGAAGTTCTATATAAAGCAACAGAAGAATATTCTCCTGAAAATGACAGGGGTATCATCTGGAATGATCATGAAATAGGTGTAAACTGGCAAATGGACAACCCTATTGTTTCAGAAAAAGATGAAATACTGCCATATCTACAGGAAGCAGATATAGATTTCAAATTTTAA
PROTEIN sequence
Length: 185
MPFEFKKLEIPEIILVTPRVFGDDRGFFMETYKKSEFAKNGITEEFVQDNHSKSSKGVLRGLHYQKNPKAQGKLIRCTKGEIFDVGVDIRKGSPTFGKWCRVVLSEQNRQMLYVPAGFAHGFLVLSDEAEVLYKATEEYSPENDRGIIWNDHEIGVNWQMDNPIVSEKDEILPYLQEADIDFKF*