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ACD20_90_10

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 8926..9453

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein rimm similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 171.0
  • Bit_score: 127
  • Evalue 4.50e-27
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=4 to=169 evalue=4.2e-46 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.20e-46
Translation proteins (db=superfamily db_id=SSF50447 from=3 to=91 evalue=2.7e-18 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.70e-18

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 528
GTGGAAAAACTACTATCAATAGGGAAAATCTTAAATTTCCATGGGATTCATGGTGAAGTAAAAGTCGGTTTTACCCCCGGCAAAGAAGAAAGATTAACTGAACTGCGTCAGGTTTATGCGGTAAAAGATTCTAAAACTACATCATTAACCATTCAGTCACTTCGTTTTCATAAGAATTTTGCTTTGATTAAATTCAAGGAGATATCTTCTATAGATGAAGTATTAGAACTTAAAGGAGCATATTTGAAAGTTCCAAAGAGTGAAATTAAAGGTGAATTAGAAGAAGACGAATTTTACATCGATGATCTTATTGGGGTTGAAGTTTATGATGTTGACGGAAACCAGCTTGGCAGTGTAATCTCAGTTATAAGCTTAAAAAATGAAGAAGATGTACTTGCTGTAAAAGATAAGAACAATAAAGAACATCTTATTCCTTTTGTTAAAGACATAGTTCCTGAAGTTAATATAGAAAATAATAAAATTGTTATACGTAATATTCCTGGCCTTTTGGAGAAAGTGAAGGAATAA
PROTEIN sequence
Length: 176
VEKLLSIGKILNFHGIHGEVKVGFTPGKEERLTELRQVYAVKDSKTTSLTIQSLRFHKNFALIKFKEISSIDEVLELKGAYLKVPKSEIKGELEEDEFYIDDLIGVEVYDVDGNQLGSVISVISLKNEEDVLAVKDKNNKEHLIPFVKDIVPEVNIENNKIVIRNIPGLLEKVKE*