Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
tRNA pseudouridine synthase A (EC:5.4.99.12) | similarity |
KEGG
DB: KEGG |
45.2 | 241.0 | 203 | 8.00e-50 | tjr:TherJR_0330 |
tRNA-pseudouridine synthase A, prokaryotic type (db=HMMPIR db_id=PIRSF001430 from=20 to=278 evalue=6.0e-80 interpro_id=IPR001406 interpro_description=Pseudouridine synthase I, TruA GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 6.00e-80 | tjr:TherJR_0330 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=18 to=280 evalue=5.1e-73 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.10e-73 | tjr:TherJR_0330 |
hisT_truA: tRNA pseudouridine synthase A (db=HMMTigr db_id=TIGR00071 from=23 to=257 evalue=2.0e-69 interpro_id=IPR001406 interpro_description=Pseudouridine synthase I, TruA GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.00e-69 | tjr:TherJR_0330 |
PSEUDOURIDYLATE SYNTHASE (db=HMMPanther db_id=PTHR11142 from=23 to=283 evalue=1.5e-63 interpro_id=IPR001406 interpro_description=Pseudouridine synthase I, TruA GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 1.50e-63 | tjr:TherJR_0330 |
no description (db=Gene3D db_id=G3DSA:3.30.70.660 from=126 to=261 evalue=6.8e-35 interpro_id=IPR020095 interpro_description=Pseudouridine synthase I, TruA, C-terminal GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.80e-35 | tjr:TherJR_0330 |
no description (db=Gene3D db_id=G3DSA:3.30.70.580 from=18 to=124 evalue=9.6e-31 interpro_id=IPR020094 interpro_description=Pseudouridine synthase I, TruA, N-terminal GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 9.60e-31 | tjr:TherJR_0330 |
PseudoU_synth_1 (db=HMMPfam db_id=PF01416 from=165 to=262 evalue=4.7e-20 interpro_id=IPR020097 interpro_description=Pseudouridine synthase I, TruA, alpha/beta domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.70e-20 | tjr:TherJR_0330 |
PseudoU_synth_1 (db=HMMPfam db_id=PF01416 from=26 to=121 evalue=8.6e-08 interpro_id=IPR020097 interpro_description=Pseudouridine synthase I, TruA, alpha/beta domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.60e-08 | tjr:TherJR_0330 |
TruA (db=HAMAP db_id=MF_00171 from=21 to=262 evalue=31.56 interpro_id=IPR001406 interpro_description=Pseudouridine synthase I, TruA GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 3.16e+01 | tjr:TherJR_0330 |
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy |
UNIPROT
DB: UniProtKB |
100.0 | 287.0 | 572 | 4.30e-160 | K2DCJ5_9BACT | |
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine synthase A [EC:5.4.99.12] alias=ACD20_C00099G00011,ACD20_303.15031.13G0011,ACD20_303.15031.13_11 id=19974 tax=ACD20 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 571 | 1.20e-160 | tjr:TherJR_0330 |