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ACD20_99_14 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
58.2 208.0 259 1.20e-66 ddf:DEFDS_1746
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=206 evalue=9.1e-89 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
null null null 9.10e-89 ddf:DEFDS_1746
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=206 evalue=5.9e-67) iprscan interpro
DB: superfamily
null null null 5.90e-67 ddf:DEFDS_1746
no description (db=Gene3D db_id=G3DSA:1.10.1050.10 from=1 to=111 evalue=2.2e-39) iprscan interpro
DB: Gene3D
null null null 2.20e-39 ddf:DEFDS_1746
Ribosomal_S4 (db=HMMPfam db_id=PF00163 from=2 to=97 evalue=6.4e-19 interpro_id=IPR001912 interpro_description=Ribosomal protein S4 GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
null null null 6.40e-19 ddf:DEFDS_1746
no description (db=HMMSmart db_id=SM00363 from=98 to=160 evalue=2.6e-18 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
null null null 2.60e-18 ddf:DEFDS_1746
S4 (db=HMMPfam db_id=PF01479 from=99 to=145 evalue=3.9e-17 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
null null null 3.90e-17 ddf:DEFDS_1746
30S 40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR11831 from=95 to=145 evalue=3.8e-07 interpro_id=IPR001912 interpro_description=Ribosomal protein S4 GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
null null null 3.80e-07 ddf:DEFDS_1746
30S RIBOSOMAL PROTEIN S4P (db=HMMPanther db_id=PTHR11831:SF4 from=95 to=145 evalue=3.8e-07) iprscan interpro
DB: HMMPanther
null null null 3.80e-07 ddf:DEFDS_1746
S4 (db=ProfileScan db_id=PS50889 from=98 to=158 evalue=15.451 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
null null null 1.55e+01 ddf:DEFDS_1746
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 alias=ACD20_C00099G00014,ACD20_303.15031.13G0014,ACD20_303.15031.13_14 id=19976 tax=ACD20 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm similarity UNIREF
DB: UNIREF90
100.0 null 414 1.40e-113 ddf:DEFDS_1746
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
99.5 206.0 414 1.10e-112 K2EC23_9BACT
  • SCG Annotations
  • BSCG ribosomal protein S4