Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpsD; 30S ribosomal protein S4 | similarity |
KEGG
DB: KEGG |
58.2 | 208.0 | 259 | 1.20e-66 | ddf:DEFDS_1746 |
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=206 evalue=9.1e-89 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 9.10e-89 | ddf:DEFDS_1746 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=206 evalue=5.9e-67) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.90e-67 | ddf:DEFDS_1746 |
no description (db=Gene3D db_id=G3DSA:1.10.1050.10 from=1 to=111 evalue=2.2e-39) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.20e-39 | ddf:DEFDS_1746 |
Ribosomal_S4 (db=HMMPfam db_id=PF00163 from=2 to=97 evalue=6.4e-19 interpro_id=IPR001912 interpro_description=Ribosomal protein S4 GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.40e-19 | ddf:DEFDS_1746 |
no description (db=HMMSmart db_id=SM00363 from=98 to=160 evalue=2.6e-18 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.60e-18 | ddf:DEFDS_1746 |
S4 (db=HMMPfam db_id=PF01479 from=99 to=145 evalue=3.9e-17 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 3.90e-17 | ddf:DEFDS_1746 |
30S 40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR11831 from=95 to=145 evalue=3.8e-07 interpro_id=IPR001912 interpro_description=Ribosomal protein S4 GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.80e-07 | ddf:DEFDS_1746 |
30S RIBOSOMAL PROTEIN S4P (db=HMMPanther db_id=PTHR11831:SF4 from=95 to=145 evalue=3.8e-07) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 3.80e-07 | ddf:DEFDS_1746 |
S4 (db=ProfileScan db_id=PS50889 from=98 to=158 evalue=15.451 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.55e+01 | ddf:DEFDS_1746 |
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 alias=ACD20_C00099G00014,ACD20_303.15031.13G0014,ACD20_303.15031.13_14 id=19976 tax=ACD20 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 414 | 1.40e-113 | ddf:DEFDS_1746 |
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
99.5 | 206.0 | 414 | 1.10e-112 | K2EC23_9BACT |