Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
30S ribosomal protein S13 | similarity |
KEGG
DB: KEGG |
69.4 | 121.0 | 166 | 3.50e-39 | tco:Theco_0307 |
30S ribosomal protein S13 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN7_9FIRM (db=UNIREF evalue=3.0e-39 bit_score=163.0 identity=71.31 coverage=98.3606557377049) | similarity |
UNIREF
DB: UNIREF |
71.31 | 98.36 | 163 | 3.00e-39 | tco:Theco_0307 |
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | tco:Theco_0307 |
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=87 to=100 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | tco:Theco_0307 |
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=114 evalue=1.3e-73 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.30e-73 | tco:Theco_0307 |
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=121 evalue=4.1e-55) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.10e-55 | tco:Theco_0307 |
30S RIBOSOMAL PROTEIN S13 (db=HMMPanther db_id=PTHR10871:SF1 from=1 to=121 evalue=4.1e-55) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 4.10e-55 | tco:Theco_0307 |
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=115 evalue=2.4e-52 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPIR |
null | null | null | 2.40e-52 | tco:Theco_0307 |
S13-like H2TH domain (db=superfamily db_id=SSF46946 from=2 to=120 evalue=1.8e-43 interpro_id=IPR010979 interpro_description=Ribosomal protein S13-like, H2TH GO=Molecular Function: nucleic acid binding (GO:0003676)) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.79e-43 | tco:Theco_0307 |
Ribosomal_S13 (db=HMMPfam db_id=PF00416 from=3 to=108 evalue=1.8e-39 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.80e-39 | tco:Theco_0307 |
no description (db=Gene3D db_id=G3DSA:1.10.8.50 from=1 to=71 evalue=6.6e-23) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.60e-23 | tco:Theco_0307 |
no description (db=Gene3D db_id=G3DSA:4.10.910.10 from=72 to=121 evalue=5.5e-16) | iprscan |
interpro
DB: Gene3D |
null | null | null | 5.50e-16 | tco:Theco_0307 |
RIBOSOMAL_S13_2 (db=ProfileScan db_id=PS50159 from=4 to=111 evalue=40.233 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 4.02e+01 | tco:Theco_0307 |
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 121.0 | 240 | 1.60e-60 | K2DCK4_9BACT |