ggKbase home page

ACD20_187_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ABC transporter rbh KEGG
DB: KEGG
56.4 578.0 660 3.80e-187 emi:Emin_0888
ABC transporter similarity KEGG
DB: KEGG
56.4 578.0 660 3.80e-187 emi:Emin_0888
rbh rbh UNIREF
DB: UNIREF
null null null null emi:Emin_0888
transmembrane_regions (db=TMHMM db_id=tmhmm from=164 to=183) iprscan interpro
DB: TMHMM
null null null null emi:Emin_0888
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=160) iprscan interpro
DB: TMHMM
null null null null emi:Emin_0888
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=267) iprscan interpro
DB: TMHMM
null null null null emi:Emin_0888
seg (db=Seg db_id=seg from=25 to=38) iprscan interpro
DB: Seg
null null null null emi:Emin_0888
transmembrane_regions (db=TMHMM db_id=tmhmm from=271 to=293) iprscan interpro
DB: TMHMM
null null null null emi:Emin_0888
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43) iprscan interpro
DB: TMHMM
null null null null emi:Emin_0888
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85) iprscan interpro
DB: TMHMM
null null null null emi:Emin_0888
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=479 to=493 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887)) iprscan interpro
DB: PatternScan
null null null 0.0 emi:Emin_0888
LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA (db=HMMPanther db_id=PTHR19242:SF91 from=11 to=589 evalue=7.4e-211) iprscan interpro
DB: HMMPanther
null null null 7.40e-211 emi:Emin_0888
ATP-BINDING CASSETTE TRANSPORTER (db=HMMPanther db_id=PTHR19242 from=11 to=589 evalue=7.4e-211) iprscan interpro
DB: HMMPanther
null null null 7.40e-211 emi:Emin_0888
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=307 to=578 evalue=2.7e-75) iprscan interpro
DB: Gene3D
null null null 2.70e-75 emi:Emin_0888
ABC transporter transmembrane region (db=superfamily db_id=SSF90123 from=1 to=498 evalue=5.5e-72 interpro_id=IPR011527 interpro_description=ABC transporter, transmembrane domain, type 1 GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021), Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626), Biological Process: transmembrane transport (GO:0055085)) iprscan interpro
DB: superfamily
null null null 5.50e-72 emi:Emin_0888
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=342 to=562 evalue=1.1e-67) iprscan interpro
DB: superfamily
null null null 1.10e-67 emi:Emin_0888
(db=HMMPfam db_id=PF00664 from=26 to=296 evalue=1.4e-30 interpro_id=IPR001140 interpro_description=ABC transporter, transmembrane domain GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021), Molecular Function: ATPase activity, coupled to transmembrane movement of substances (GO:0042626), Biological Process: transmembrane transport (GO:0055085)) iprscan interpro
DB: HMMPfam
null null null 1.40e-30 emi:Emin_0888
(db=HMMPfam db_id=PF00005 from=382 to=507 evalue=2.8e-22 interpro_id=IPR003439 interpro_description=ABC transporter-like GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887)) iprscan interpro
DB: HMMPfam
null null null 2.80e-22 emi:Emin_0888
no description (db=HMMSmart db_id=SM00382 from=367 to=559 evalue=9.1e-12 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111)) iprscan interpro
DB: HMMSmart
null null null 9.10e-12 emi:Emin_0888
ABC_TRANSPORTER_2 (db=ProfileScan db_id=PS50893 from=342 to=576 evalue=24.463 interpro_id=IPR003439 interpro_description=ABC transporter-like GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887)) iprscan interpro
DB: ProfileScan
null null null 2.45e+01 emi:Emin_0888
ABC_TM1F (db=ProfileScan db_id=PS50929 from=26 to=308 evalue=45.375 interpro_id=IPR017940 interpro_description=ABC transporter, integral membrane type 1) iprscan interpro
DB: ProfileScan
null null null 4.54e+01 emi:Emin_0888
Phospholipid-lipopolysaccharide ABC transporter {ECO:0000313|EMBL:EKE02029.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
100.0 589.0 1141 0.0 K2E7N1_9BACT
UniRef90_C3X8L6 Phospholipid-lipopolysaccharide ABC transporter n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X8L6_OXAFO alias=ACD20p_2071.12458.16_2,ACD20p_2071.12458.16G0002,ACD20_C00187G00002 id=20652 tax=ACD20 species=Oxalobacter formigenes genus=Oxalobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm similarity UNIREF
DB: UNIREF90
100.0 null 1141 0.0 emi:Emin_0888