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rifcsphigho2_01_scaffold_1300_33

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_200

partial RP 35 / 55 MC: 5 BSCG 5 / 51 ASCG 28 / 38
Location: 27314..27502

Top 3 Functional Annotations

Value Algorithm Source
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6); K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] Tax=CG_Pacearch_03 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 60.0
  • Bit_score: 79
  • Evalue 2.40e-12
Transcription elongation factor Spt4 n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3D4_THEAM similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 60.0
  • Bit_score: 66
  • Evalue 1.50e-08
Spt4; transcription elongation factor Spt4/RpoE2, zinc finger protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 59.0
  • Bit_score: 66
  • Evalue 4.30e-09

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Taxonomy

CG_Pacearch_03 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 189
ATGGCGCAAAAAATATGTAAGGGATGCAAGTCAATATTTGAAGGGGGCAATGAATGCCCTAATTGTGGCTCTAAGGAGTTCGCAGAAAATTATAAAGGCAAAATGGTAATAATAAATCCTGAAAGTTCTGAAATTGCTAAAAATCTTAAACTATCTAAGAAAGGAACATTCGCGGTGAAGCTAGGATGA
PROTEIN sequence
Length: 63
MAQKICKGCKSIFEGGNECPNCGSKEFAENYKGKMVIINPESSEIAKNLKLSKKGTFAVKLG*