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rifcsphigho2_01_scaffold_17807_4

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_200

partial RP 35 / 55 MC: 5 BSCG 5 / 51 ASCG 28 / 38
Location: comp(7158..7856)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 233.0
  • Bit_score: 274
  • Evalue 1.90e-70
DNA-directed RNA polymerase, subunit D n=1 Tax=nanoarchaeote Nst1 RepID=R1G3G0_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 35.9
  • Coverage: 231.0
  • Bit_score: 133
  • Evalue 2.20e-28
DNA-directed RNA polymerase subunit D similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 255.0
  • Bit_score: 132
  • Evalue 1.40e-28

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 699
ATGGAAATAGTGCAAAAAACTCCCCAGCTGCTGGTTATTCGCACCGACGCAAATGAACCATTGGCAAATGCTTTGCGAAGAAGCGTTTCAGAAGTTCCAACACTGGCAATAGATGAAGTGGAGATATTCAAAAATGATTCTGCTATCTACGACGAGATGCTTGCTCATCGTCTTGGGCTTGTAGCTTTAAAGACTGAAAAATCAATTTCATCAAAAACAAAGATAGACTTGAAATTATCTAAAATAGGACCTGGAATAGTCTATGCAGGTGATTTGGATGGCAACGCAGAAGTTATTTATCCTAAAACTCCATTGACAATATTGTCTGGAAACAATAAGCTTGAGCTGGTGGCGACTGCAAGTCTTGGCAGGGGAATTTCACACGCTAAATATGTTCCGGGATTATGCTATTATAAGCATATAAAAGAAATACTCTCATCACCGCAAATAGATCAGATTGTGCAAAAATCTAAGTTGGGCTTTATCAAGCCTGAAAAGAATGGCTCTAAATGGATTTGCGATTTAAACGACGCAGAAATAGATGCAATAAATACATTAGACAATGAAGCTATTAAAGATTCATCAGAGATATTATTTGTCATAGAATCCTTCGGTCAGATGGACGCAAAGGATATATTCTTAAAATCAGTTCAGGCGCTCGAGGACAATTTAGATGAGTGCGAGAAGGCACTAAAATAG
PROTEIN sequence
Length: 233
MEIVQKTPQLLVIRTDANEPLANALRRSVSEVPTLAIDEVEIFKNDSAIYDEMLAHRLGLVALKTEKSISSKTKIDLKLSKIGPGIVYAGDLDGNAEVIYPKTPLTILSGNNKLELVATASLGRGISHAKYVPGLCYYKHIKEILSSPQIDQIVQKSKLGFIKPEKNGSKWICDLNDAEIDAINTLDNEAIKDSSEILFVIESFGQMDAKDIFLKSVQALEDNLDECEKALK*