ggKbase home page

rifcsphigho2_01_scaffold_1431_19

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_33_11

near complete RP 37 / 55 MC: 5 BSCG 5 / 51 ASCG 32 / 38 MC: 3
Location: comp(16313..16870)

Top 3 Functional Annotations

Value Algorithm Source
rpl30p; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=AR9 similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 174.0
  • Bit_score: 161
  • Evalue 1.10e-36
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 163.0
  • Bit_score: 133
  • Evalue 3.00e-28
rpl30p; 50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 144.0
  • Bit_score: 120
  • Evalue 5.80e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR9 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 558
ATGCCTAAAAATACAGATTCAGCAAAAAAAGACTTAGCGGTTAAAAGTTCTACAGTTGTTTCTTCATCCGTTAAATCTCCAACTAAACTAGTTTCAGCTAAAGCCGCAGCTCATAGCGCCAATACTGAATCAAAGATGCTAGCCATTATTTTAATTCGTGGAAGAGAACGCGGAACTCCTGCTCCTATCAAAGGAACTTTGGATTTGTTAAAATTATTGAAAAAAAACAATTGTGTCTTATTTAAATCCAATCCTGCATTACAAGGGATGCTACAAAAAGTTAAAGATTATGTTACCTGGGGAGAATTATCTGACCCAACTTACAAAGTACTGTTAGAAAAGCGAGGAAAGTTATTTGAAGGACCTTTAATGGATCGTCATAATAAATATTCCTATAATTACAGCGAGATTAATGGACAAAAGTATAAAAGTTACTTTACTTTAAATCCTCCACGCAAAGGTTTTGGTCGAAAGGGCATAAAAGTTGCTTTCCAAGCTGGCGGTGCTTTAGGTTACAGGGGAGAAAAAATTAACGATTTAATTGAGAGGATGGTTTAG
PROTEIN sequence
Length: 186
MPKNTDSAKKDLAVKSSTVVSSSVKSPTKLVSAKAAAHSANTESKMLAIILIRGRERGTPAPIKGTLDLLKLLKKNNCVLFKSNPALQGMLQKVKDYVTWGELSDPTYKVLLEKRGKLFEGPLMDRHNKYSYNYSEINGQKYKSYFTLNPPRKGFGRKGIKVAFQAGGALGYRGEKINDLIERMV*