ggKbase home page

rifcsphigho2_01_scaffold_32765_1

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_33_11

near complete RP 37 / 55 MC: 5 BSCG 5 / 51 ASCG 32 / 38 MC: 3
Location: comp(3..575)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR9 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 192.0
  • Bit_score: 287
  • Evalue 1.40e-74
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 175.0
  • Bit_score: 181
  • Evalue 5.90e-43
DNA-directed RNA polymerase subunit D similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 175.0
  • Bit_score: 181
  • Evalue 1.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR9 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 573
ATGAAATTAGAAAAATTAAAAGAAGAAAAAAAGAAAAGTAAATTAGTTTTACTAATCAAAGGCGCCGATGAAGTATTTGCAAATACTATTCGTCGCTTAATTGTAGAAGAAGTTCCAACCTTAGCTGTTGAAGACTTAGAAATTAAAGATAATAACTCCGCACTTTATGACGAAATGCTAGCTTTACGTATTGGTTTAGTTCCTATCAAAACTGATTTGGGTAGTTATACATTGAAAGAAAAGTGTAAATGTGCTGGCGCTGGCTGTGCACGTTGCGAATTAAAAATAACTCTTAAAGCTTCCAAGAAAGGCTATGTTTATGCTGAAGAAGCTAAAAGTACTGATCCAAAATGTACTTTTGTACAAGAAAAAATGCCTATTGTTAAGCTGATTGCTAAACAAAAAGTAGATGTACAGATGACTGCCATTTTGGGACAAGGTAAAACTCACATTAAATGGTCACCAGGAATTGCTTTTTATAAACATGAGCCAGTGCTTAAAGTTGGTAGTATTAAAAATCCAGATTTGGTGATGGAACAATGTACTGATGGTGTTTTTGAGCAAAAAGGCAGT
PROTEIN sequence
Length: 191
MKLEKLKEEKKKSKLVLLIKGADEVFANTIRRLIVEEVPTLAVEDLEIKDNNSALYDEMLALRIGLVPIKTDLGSYTLKEKCKCAGAGCARCELKITLKASKKGYVYAEEAKSTDPKCTFVQEKMPIVKLIAKQKVDVQMTAILGQGKTHIKWSPGIAFYKHEPVLKVGSIKNPDLVMEQCTDGVFEQKGS