ggKbase home page

rifcsphigho2_01_scaffold_32765_4

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_33_11

near complete RP 37 / 55 MC: 5 BSCG 5 / 51 ASCG 32 / 38 MC: 3
Location: comp(1954..2499)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 171.0
  • Bit_score: 187
  • Evalue 1.40e-44
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 153.0
  • Bit_score: 164
  • Evalue 9.20e-38
30S ribosomal protein S13P similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 147.0
  • Bit_score: 154
  • Evalue 3.50e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR9 → Archaea

Sequences

DNA sequence
Length: 546
ATGGCAGAAAAACAAGTAAATCCAGAAATTAAACAAACTTCAGAAGTTAAACAAACTTCAGAAGTTAAACAAGATTATAAGCATATTGTTCGCGTAGCTAACGTAGACTTGCCTGGTGAAAAAAGCTTAATTGTAGCTTTAACTAAGATTAAAGGCGTAGGTATGAATTTAGCTCATGCAATATGTAAATCTGCTAAAGTAAATCAGGCCATCAGAGCCGGTCATCTTACTGATGAACAAATAAAATCACTAAATCAAGTCACTTCTAATTTTTCTTCTTTACCTAAATGGTTATTTAATCGTCGTAAAGATTTTGAAACTGGGGATGATATGCACCTTCTAACCGGTAATTTAACATTTTATGTTGATAATGATCTTAAGAGAATGAAGAAAATCAAGAGTTACAAAGGTTTGAGACATCAAAAAGGCTTAACTGTTAGAGGTCAAAGAACTAAATCTAACTTCAGGAAAAACAAAGGTAAAGTTGTAGGGGTTGTTAAGAAAAAAATAGCTCCAGAAGCAGGAGATAAGAAAGATAAAAAGTAG
PROTEIN sequence
Length: 182
MAEKQVNPEIKQTSEVKQTSEVKQDYKHIVRVANVDLPGEKSLIVALTKIKGVGMNLAHAICKSAKVNQAIRAGHLTDEQIKSLNQVTSNFSSLPKWLFNRRKDFETGDDMHLLTGNLTFYVDNDLKRMKKIKSYKGLRHQKGLTVRGQRTKSNFRKNKGKVVGVVKKKIAPEAGDKKDKK*