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rifcsphigho2_01_scaffold_6326_14

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Diapherotrites_AR10_34_14

near complete RP 34 / 55 MC: 4 BSCG 17 / 51 ASCG 34 / 38 MC: 1
Location: comp(9532..10329)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO55689.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 256.0
  • Bit_score: 289
  • Evalue 3.90e-75
exosome complex component RRP42 similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 258.0
  • Bit_score: 253
  • Evalue 4.80e-65
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5241845 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 258.0
  • Bit_score: 253
  • Evalue 1.70e-64

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Taxonomy

archaeon GW2011_AR21 → Archaea

Sequences

DNA sequence
Length: 798
ATGGGGTATGAAAATGTTTTATGGAAACTGCAGGGAGACAAAGTTTTAGAGTCAATCAATGCAGGAAAAAGACTGGATGCAAGAAAGTTTGATGAATACAGGAAAATTGAAATCAGAAAAGATATAAGCCATTTGGCTGAAGCAACAACTCAAGTGAAGCTTGGAAACACTGAGGTAATCTGCGGAATTAAATTGGAAATCGGAGTGCCTTATCCGGACTCCCCTGAAGAAGGATCAATGAGCACTTCAGTTGAACTGCTTCCATTGGCTTCGCCTGAATTTGAGTCAGGGCCTCCAAGTGAAAACGCAATTGAAATCGGAAGAGTAGTTGACAGAAGCATTAGGGAAGGAGGCTGCCTGGATTTCAAGGACTTATTTGTTGAAGAGGGAAAGTCTTGGATTGCCTTCATTGATTTTTATCCAATAAATTATGACGGAAACCTTTTCGATGCCTGCTCCATAGCTGGAATGAGTGCTTTGCTTAACGCCAAGATTCCTAAATTAGAGGACGGAGTTATTGTGAGAGGGGAATGGAAAGGAAAATTAAAGTTAAAGAATCACGCAGTGCTTAATTCTTTTGCAAAGATAGGGAACTCAATTGTTGCTGATCCTTCAATTGCAGAGGAAAAGGCTTTAACTTCAAGGATTCATATTTCCTTTAACTCTGATGGCAACTTAAATGCTTTCCAGAAAGGAGGGCCAGGCTCTTTAACTGCAAATGAATTAGATCAAGCAATTGACACTGGGTTGAAAAACTCAAAGCATTTGATTAAAATCATTGAGGAAAGCTCTGAATAA
PROTEIN sequence
Length: 266
MGYENVLWKLQGDKVLESINAGKRLDARKFDEYRKIEIRKDISHLAEATTQVKLGNTEVICGIKLEIGVPYPDSPEEGSMSTSVELLPLASPEFESGPPSENAIEIGRVVDRSIREGGCLDFKDLFVEEGKSWIAFIDFYPINYDGNLFDACSIAGMSALLNAKIPKLEDGVIVRGEWKGKLKLKNHAVLNSFAKIGNSIVADPSIAEEKALTSRIHISFNSDGNLNAFQKGGPGSLTANELDQAIDTGLKNSKHLIKIIEESSE*