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rifcsphigho2_01_scaffold_6326_16

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Diapherotrites_AR10_34_14

near complete RP 34 / 55 MC: 4 BSCG 17 / 51 ASCG 34 / 38 MC: 1
Location: comp(11051..11794)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component RRP4 {ECO:0000313|EMBL:KHO55691.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 205.0
  • Bit_score: 233
  • Evalue 2.40e-58
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 205.0
  • Bit_score: 229
  • Evalue 9.00e-58
exosome complex RNA-binding protein Rrp4 id=5241843 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 206.0
  • Bit_score: 229
  • Evalue 3.20e-57

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Taxonomy

archaeon GW2011_AR21 → Archaea

Sequences

DNA sequence
Length: 744
ATGGATAAAGCAATTGAAGTAAAGTCAATGCATGCAGTGCATGCTGGAAAAGAAGTTGGAAAAGAAGCTGAAAAAGAAGAAGAATTTAATGCGGAGAGCAGTCAAAGCGAATTAAATGAAAAAGAGAAAAAAATTGTTGTTCCCGGAGAGCTTTTAACTGACAAGAAAAAAAGGCTTGGAGAGCATGTTTATTTAAGGGAAGGAAAAATTTTTTCTGATTCTCTTGGGTTTGTAAGCGAGTCAGAGGCATTCATTTCAGTTGTTCCTTTGCAGGGAGTTTACACTCCAAGAGCAGGCGATGTAGTTGTAGGAATTATTTCGGATGAAAAACACAACGGCTACTTGGTTGACATTAATTCTTTTTACGCAAACTTTATTTTAAAGTCAAGCAGGGGCCCAGTGCTTAAACTCAATGCAGTTGTTTCAGCTAAAGTGTTTAAGGTAAGTGAGTTAAATGAAGCTGATTTGGGCCAGGTAAGGCAGTTTTATGGGGGAGAAATTTTAAGGGTTTCTCCTGTAAAGGTTCCAAGAATTATTGGAAAAAACAATTCAATGCTTGAAGTTTTAAGGAACGGAACAAACTCAAACATAATGGTTGGAAGAAACGGATACGTTTGGATTAAGGACGGAAATGCTGCTTTGGCTGTTAAAGCAATTAAGAAAATTGAAATGGAAGCTCATTTATCTAACTTGACTAACAGGATTAATGATTTTTTGATTGAGAATAAGGAAGTGAATAAATGA
PROTEIN sequence
Length: 248
MDKAIEVKSMHAVHAGKEVGKEAEKEEEFNAESSQSELNEKEKKIVVPGELLTDKKKRLGEHVYLREGKIFSDSLGFVSESEAFISVVPLQGVYTPRAGDVVVGIISDEKHNGYLVDINSFYANFILKSSRGPVLKLNAVVSAKVFKVSELNEADLGQVRQFYGGEILRVSPVKVPRIIGKNNSMLEVLRNGTNSNIMVGRNGYVWIKDGNAALAVKAIKKIEMEAHLSNLTNRINDFLIENKEVNK*