ggKbase home page

rifcsphigho2_01_scaffold_24938_17

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Diapherotrites_AR10_34_14

near complete RP 34 / 55 MC: 4 BSCG 17 / 51 ASCG 34 / 38 MC: 1
Location: comp(9335..9652)

Top 3 Functional Annotations

Value Algorithm Source
Putative thioredoxin n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS7_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 98.0
  • Bit_score: 116
  • Evalue 2.20e-23
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.; similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 101.0
  • Bit_score: 120
  • Evalue 1.20e-24
trxA4; thioredoxin similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 98.0
  • Bit_score: 116
  • Evalue 6.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Porphyromonas sp. COT-108 OH1349 → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 318
ATGGAAAAATTAACTGACGGGAACTTTAAGAAAAAAATTAAGGAAAAAGAATTATTTTTGGTTGATTTCTGGGCTGAATGGTGCGGGCCATGCAGAATGATGGAGCCCATTCTGGAAGAAATTGACAGAGAATTTGAAGGAAAAATTTCAATAGGAAAATTAAATGTAGATGAGAATCAGGCAACTGCCCAGGAATTTGAAGTTAGAAGCATTCCAACATTCATTTTTTTCAGAAAAGGAGCAGTGGCTCAGGAATCAATAGGCGGAATGACAAAGCATGATTTAAGCGAAAAAATAAAAGAATTCATTGAAGAATAA
PROTEIN sequence
Length: 106
MEKLTDGNFKKKIKEKELFLVDFWAEWCGPCRMMEPILEEIDREFEGKISIGKLNVDENQATAQEFEVRSIPTFIFFRKGAVAQESIGGMTKHDLSEKIKEFIEE*