ggKbase home page

rifcsphigho2_01_scaffold_6257_1

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_29_27

partial RP 37 / 55 MC: 8 BSCG 7 / 51 ASCG 30 / 38 MC: 2
Location: comp(2..523)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 169.0
  • Bit_score: 190
  • Evalue 1.50e-45
tRNA-dihydrouridine synthase (DusB) {ECO:0000313|EMBL:AIF18642.1}; TaxID=1456522 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_83_G similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 171.0
  • Bit_score: 250
  • Evalue 1.30e-63
dusB; tRNA-dihydrouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 171.0
  • Bit_score: 172
  • Evalue 1.20e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured marine group II/III euryarchaeote KM3_83_G03 → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 522
ATGACATTTAAAAAATTTCCGAAATTAAAGAGTCTTGCTGTTTTAAGTCCTATGGCTGGAGTTACAGATGTAGCTTTTAGAGCTTTATGTAAGAGATATGGGGCTGGTTTAACTTATACTGAGTTTGTTAGTGGAACTGCTATTGTTAAAGGATATAATAAGACATTAAAAATGATTGAGACTGATGAAAGTGAAAAACCTGTTGCTGTCCAACTATTTGGAAATTCTATAGATGATGTTGTTAATGCTGCTAAATTAATTCAAGATAAGTTTGATATTATTGATGTAAATTGTGGATGTCCTGCTTGGAAAGTTATTAAAACTGGAGCTGGAAGTGAATTATTAAAAAAACCAGAGGAAATTGCTAAATTCATTAGTAAATTAGTAAATAATGTTGATAAACCAATTACAGTTAAAATTAGAGCTGGAATTGATGAAAATTCTATTAATGCTGTTAAAGTAGCTAAGTTAGTTGAAGAAGCTGGAGCAGCAGCTATTGCAATTCATGGAAGAACTCAAAAA
PROTEIN sequence
Length: 174
MTFKKFPKLKSLAVLSPMAGVTDVAFRALCKRYGAGLTYTEFVSGTAIVKGYNKTLKMIETDESEKPVAVQLFGNSIDDVVNAAKLIQDKFDIIDVNCGCPAWKVIKTGAGSELLKKPEEIAKFISKLVNNVDKPITVKIRAGIDENSINAVKVAKLVEEAGAAAIAIHGRTQK