ggKbase home page

rifcsphigho2_01_scaffold_18643_13

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_14

partial RP 30 / 55 MC: 5 BSCG 17 / 51 MC: 1 ASCG 26 / 38
Location: 9517..10140

Top 3 Functional Annotations

Value Algorithm Source
rRNA metabolism protein, SBDS family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAF5_METCZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 210.0
  • Bit_score: 176
  • Evalue 2.10e-41
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 208.0
  • Bit_score: 224
  • Evalue 1.20e-55
rRNA metabolism protein, SBDS family similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 210.0
  • Bit_score: 176
  • Evalue 5.80e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_05 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 624
ATGAGTAGCGTTGAAGCAAAATTAAGAACTAACGGCAAGATATTCGGCATATTAGTAGATTCTGATAAGGCCATAGCGTTCAGGGAAGGGCGCCTGAAGAATGCCTCGGATGCTCTCGCCAGCGAGGATGTTTATTCCGATATAAAGAAGGGCATGAAGGCTTCTGAATCTGACATTGTGAAAGCATTCGGAACTAAAGAGATGTCAAAAATAGCTGAAAGAATAATAAAGAATGGAGACCTGCAGATTCCTTCAGATTACAAACACAAGCAGAGAGAGGAAAAACTAAAGCAGGTGATAGAGTTCATATCAAGAAACGCTGTTGACCCAAAAACAAACAAGCCCCACAGCTCTGAAAGGATAAAAATGGCAATAGAACAGTCAGGAATTAATATTGACAACAGAGCTGTGGAGGAGCAGGTTGGAGGAATAATTGAGAAGTTAAAGGAAGTGCTCCCGATAAAAGTTGAGACCAAAAAGCTTAAGATTACCATACCTTCCATATACACCGGCAGGGCTTATGTAGTCATCAAGGACTTTAAGGAGAAGGAAGACTGGCTCAACAACGGAGACTTGATCTGCATTATAAACCTTCCATCAGGAATGCAGATGGAATTTTATGAC
PROTEIN sequence
Length: 208
MSSVEAKLRTNGKIFGILVDSDKAIAFREGRLKNASDALASEDVYSDIKKGMKASESDIVKAFGTKEMSKIAERIIKNGDLQIPSDYKHKQREEKLKQVIEFISRNAVDPKTNKPHSSERIKMAIEQSGINIDNRAVEEQVGGIIEKLKEVLPIKVETKKLKITIPSIYTGRAYVVIKDFKEKEDWLNNGDLICIINLPSGMQMEFYD