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bjp_ig2158_scaffold_3077_11

Organism: BJP_Ig2158_Hor_250_2014_Methylococcales_50_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(8128..8658)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A121_METMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 195
  • Evalue 3.60e-47
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 165.0
  • Bit_score: 195
  • Evalue 1.00e-47
Tax=BJP_IG2158_Methylococcales_50_91 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 176.0
  • Bit_score: 354
  • Evalue 8.60e-95

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Taxonomy

BJP_IG2158_Methylococcales_50_91 → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGCTATCGAATATGAGTCTTAATGGATTGCTGGACAATTTATTCCGTCAACATAACCAAGAATTGCTTTGCTACGCCACGCAACGGGCGGGGCAAATTGCGGATGATTTGGTTCAGGAATCATTTATACAGCTCTTGAATCACCCCGAGCCCGACAGCATCGTCAACCATCGTGCCTATCTGTATAAAATCACCAATAACCTGCTCAACGCGCATTATCGAAAACTGGCGATCATCGAGAAATACCATGAAGACTGCGAAGAACTGGACAGTTTACCTTCAAGGATTCCAGGTCTTGAACTAGCACTCCATCACGAGCAAATCCTGCGACAATGCCTGCAAGTGCTCAAAGAATTACCGGCCATGCAAAGAAATGTATTCTTCCTGCACCGCATTGATGGACTGAGTTACCCGCAGATTGCCAAAATGCTCGGCATCTCCAAGTCATCGGTAGAGCGATACTTTATCGCGGCCATGGAAAGCTGCGTGGCAGCCTCTATCCAAAACTTTAAAAACACCCCATCTCGTTGA
PROTEIN sequence
Length: 177
MLSNMSLNGLLDNLFRQHNQELLCYATQRAGQIADDLVQESFIQLLNHPEPDSIVNHRAYLYKITNNLLNAHYRKLAIIEKYHEDCEELDSLPSRIPGLELALHHEQILRQCLQVLKELPAMQRNVFFLHRIDGLSYPQIAKMLGISKSSVERYFIAAMESCVAASIQNFKNTPSR*