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bjp_ig2158_scaffold_966_17

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(16182..16820)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J1_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 212.0
  • Bit_score: 292
  • Evalue 3.40e-76
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 212.0
  • Bit_score: 303
  • Evalue 2.70e-79
ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 212.0
  • Bit_score: 294
  • Evalue 2.00e-77

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 639
ATGTCACGCTATACTGGACCGTCCTGCCGGCTCTGTCGGCGTGAAGGCACGAAGCTCTTCCTCAAGGGCACCCGCTGCCTGACCGAAAAGTGCGCCGTTGATCGGCGCGGCTACGCTCCCGGTCAGCATGGCCAGGCCGGCGGAGGCCGTCCCCGCAAGCAGTCAGAATATGCTCGGCAGCTCCGGGAAAAGCAGAAGGTCAAGCGCATGTACGGCGTGTCCGAGAAGCAGTTCCGGAACACGTTCGAGGAGGCCTCGCATCTCCCCGGCATGAAGGGCACCAATCTGCTGGTCGCGCTGGAAACCCGGCTCGACAACCTGGTCTACCGGATGGGTTTTGCCACGAGCCGAAAGGCCGCGCGCCAGCTCGTGATGCACGGCCATGTGCAGGTCAACGGGCGACGCCTCGACATCCCCTCCGCCCATGTGCGGGTGGGCGAGGAGGTGCGTGTGGCCCCGGAAAGCCGGGACCTGCTGACTATCAAGCTCGCGCGTGAGAGTGCCGCCCGCGGCGCCCCCCTCCCGTGGCTCTCCGTGGATGCCGAGAAGGCGGCTGGTCGGGTGACCGAGCTGCCCGTTCGCGAGGCGATCCCGGTCAATGCCCAGGAGCAGCTGATCGTCGAGCTCTACTCCAAGTAA
PROTEIN sequence
Length: 213
MSRYTGPSCRLCRREGTKLFLKGTRCLTEKCAVDRRGYAPGQHGQAGGGRPRKQSEYARQLREKQKVKRMYGVSEKQFRNTFEEASHLPGMKGTNLLVALETRLDNLVYRMGFATSRKAARQLVMHGHVQVNGRRLDIPSAHVRVGEEVRVAPESRDLLTIKLARESAARGAPLPWLSVDAEKAAGRVTELPVREAIPVNAQEQLIVELYSK*