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bjp_ig2158_scaffold_970_8

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(7232..7798)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 170
  • Evalue 2.30e-39
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 175.0
  • Bit_score: 216
  • Evalue 7.80e-54
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 175.0
  • Bit_score: 216
  • Evalue 3.90e-53

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 567
GTGTCCCTGAGCCCTGCGGAGCCTGTGGAACAAGACATCCTGGTTTCCCGGGTTCTGGCCCGGGATCCCGCCGCGGAGCGCGAGCTCTACGACCGCCATGTGGACCGGATCTACCGGCTCGTCTACCGCATGGTGGGGGACGCCGACCGGGCGGCGGAGTACACCCAGGACACGTTCGTCCGGGGGTTCGAGCGGCTCGGGGAGTTCCGGGGGGAAGCGGCGCTCGGCACCTGGCTCACGTCGATCGCGATCTCGGTGGTGTACAACGCGCAGCGGAAGCTGAAGCGAATCCGGAGCCGGGAGCAGGACATTGAGATGGCGGAGACGCTGGGCCGGGATGACCCGGTCCCCAACCCGATCCTCCGGGATCGGCTGAACGCCGCAGTCGGAGAGCTGCCGGAAGGATACCGGACCGTCTTTCTGATGCATGATGTGGAGGGGTTCACGCACCGGGAGATCGCGACCGCGCTGCAGGTGCAGGAGGGGACGTCGAAGGCACAACTCTCCAGGGCCCGGGCTCAGCTCCGGGTGGCCCTGGCGGACCTTGCAGGAGAATGGGTGACATGA
PROTEIN sequence
Length: 189
VSLSPAEPVEQDILVSRVLARDPAAERELYDRHVDRIYRLVYRMVGDADRAAEYTQDTFVRGFERLGEFRGEAALGTWLTSIAISVVYNAQRKLKRIRSREQDIEMAETLGRDDPVPNPILRDRLNAAVGELPEGYRTVFLMHDVEGFTHREIATALQVQEGTSKAQLSRARAQLRVALADLAGEWVT*