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bjp_ig2158_scaffold_439_5

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 3938..4471

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EA04E0 similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 180.0
  • Bit_score: 153
  • Evalue 2.10e-34
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 177.0
  • Bit_score: 231
  • Evalue 1.10e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 147
  • Evalue 3.20e-33

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Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGGATGCAATGCCGCTGGCGGATGAGGCGGTCGTTCCCAGGGCCATTGCGGGTGACCCCGCCGCCCAGGAAGCGATCTACCGGGCCTACGAGGCACCGGTGTACAACCTGGCCCGGCGGATCTGCCGGACCGTGGAGGATGCGGAGGATGTGCTCCAGGAAACCTTCCTGGAGGTCTTCCGCAGTCTCCGGCGTTTCCGGGGCAACGGGAGTCTCTGGGGGTGGATCCGGACCATCGCCGCCAGCAAGGCCCTGATGCGCCTGCGGCGAAACAGGTACCGCGACGCCGATGAGCTGGCCGAGGATCCTCCCGCCCGCCGCCAGGAGGACACCGCCCTCCGGATGGATCTGGAGGCGGCGCTGGAGCGGCTCGGAACGACCACGAGAGCCGTGGTCTGGCTTCACGACGTGGAGGGGTACACACACGAGGAAATCGCCGCCATGATGGACCGGACGGCGAGTTTTTCCAAGTCCCAGCTTTCGCGGGCGCATGCCCGCCTGCGATCCTGGCTGGGCGAGGAGGTTGCCGTATGA
PROTEIN sequence
Length: 178
MDAMPLADEAVVPRAIAGDPAAQEAIYRAYEAPVYNLARRICRTVEDAEDVLQETFLEVFRSLRRFRGNGSLWGWIRTIAASKALMRLRRNRYRDADELAEDPPARRQEDTALRMDLEAALERLGTTTRAVVWLHDVEGYTHEEIAAMMDRTASFSKSQLSRAHARLRSWLGEEVAV*