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bjp_ig2158_scaffold_439_29

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(26717..27388)

Top 3 Functional Annotations

Value Algorithm Source
nth; putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 219.0
  • Bit_score: 264
  • Evalue 3.90e-68
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=379066 species=" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 219.0
  • Bit_score: 264
  • Evalue 1.90e-67
Endonuclease III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 219.0
  • Bit_score: 264
  • Evalue 1.40e-67

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 672
ATGGGTCCGCGTCGGGCCACGTCCGCCCCCCCGTCTCCCGCTCCCGCGCTCCGTACGCGCGCACGAGCCATCCTCAGGCACCTGAAGAAGGCCTACCCCGACGCGCACTGCGCTTTGGCCTATCGGACCCCGTTCGAACTTCTGGTGGCCACGATCCTCTCGGCGCAGTGCACCGACGTCCGGGTCAACCTCACCACCCCGGCACTCTTTGCGCGGTACCCGACGCCGCGCGATCTGGCCCGCGCCGAGCGGGAGGAGTTGGAGTCGCTCATCCGATCGACGGGGTTCTTCCGCATGAAGGCCAAGAACCTGATCGGGATGGCCACGGTGCTGGTGGAAGAGCATGGGGGTGAGGTCCCCCGGACCATGGAGGCCTTGCGAGTCCTTCCCGGCGTGGGCCGGAAGACGGCGAACGTGGTGCTCGGCAATGCCTTCGGGATGAACGAGGGGATCACCGTCGACACGCACGTCGGGCGGATCGCCCGGCTCCTCGAACTGACCCGCGCGACCGACCCCGAACAGGTGGAGCGGGACCTGATGCTGTTGATTCCCCGGGGGGACTGGACCCTCGTCTCCCATCTGCTCATCAGCCATGGCCGCACGGTCTGCATCGCCCGCCGGCCCCGGTGTGGCGACTGCCCCCTGCGTACGGTCTGCCCTTCCGCCACCTGA
PROTEIN sequence
Length: 224
MGPRRATSAPPSPAPALRTRARAILRHLKKAYPDAHCALAYRTPFELLVATILSAQCTDVRVNLTTPALFARYPTPRDLARAEREELESLIRSTGFFRMKAKNLIGMATVLVEEHGGEVPRTMEALRVLPGVGRKTANVVLGNAFGMNEGITVDTHVGRIARLLELTRATDPEQVERDLMLLIPRGDWTLVSHLLISHGRTVCIARRPRCGDCPLRTVCPSAT*