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bjp_ig2158_scaffold_1027_20

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(16839..17438)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S3_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 186.0
  • Bit_score: 202
  • Evalue 4.40e-49
ECF subfamily RNA polymerase sigma-24 factor Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 188.0
  • Bit_score: 272
  • Evalue 4.80e-70
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 186.0
  • Bit_score: 202
  • Evalue 1.20e-49

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 600
GTGACCTCGCCGCCCGTGGGCGATCCCCGGGCCGACCTCACGGGACTGCTCGTCCGGTGGTCCCAGGGCGATGAAGCGGCACTGGACCTGCTGCTGCCCGTCGTGTACGACGAATGCCGGAACATCGCGGCGAGGCAGCTCCGGCACGAACGGCCGGACCACACCCTGGATCCCACCGCGCTGGTCCACGAATTGTACCTGCGACTGGTGGATCAGCGTCGCACCACGTGGGAGAACCGCGCCCATTTCTTCGGCATTGCCGCGCGGCTGATGCGTCGCATCCTGGTGGATCACGCCCGGGCCCGGCTGGCGGAGAAGCGCGGTGGATCACGCATCTTCGTTTCGCTGGAAGCAGTGGGAGAACAGATCGCCGACAGCGGAGCCGCGGACGTGCTCGCAATAGACGAAGCCCTGGACCAACTCGCGGCACGGGACCCCGACCAGCGGCGCATTGTTGAAATGCGGTTCTTCGCGGGGCTCACCGTGGAAGAGACGGCGCATGTGCTTGGACGGTCTCCCCGGACGGTGAAAAGGGAATGGCGCCTGGCCAAGGCGTGGCTCCACCGGGCACTGACGAGCCAGGACCCGGTCGAGTCGTAG
PROTEIN sequence
Length: 200
VTSPPVGDPRADLTGLLVRWSQGDEAALDLLLPVVYDECRNIAARQLRHERPDHTLDPTALVHELYLRLVDQRRTTWENRAHFFGIAARLMRRILVDHARARLAEKRGGSRIFVSLEAVGEQIADSGAADVLAIDEALDQLAARDPDQRRIVEMRFFAGLTVEETAHVLGRSPRTVKREWRLAKAWLHRALTSQDPVES*