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bjp_ig2158_scaffold_1027_23

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 21793..22422

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S3_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 164
  • Evalue 1.40e-37
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 193.0
  • Bit_score: 183
  • Evalue 6.30e-44
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG93790.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 193.0
  • Bit_score: 183
  • Evalue 3.10e-43

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 630
ATGTCGGATGACTCGGGCCAGACGACCGTCACCCGGTTACTCCGGAAGCTCTCGGCGGGTGATCGCGAGGCATTGAATGCCCTGTATCCCCTGGTCTATGACGAGCTCCGGGCGTTGGCCCGGGCCCGGCGCCGGCACCAGGGCCACTCCGATACTCTCAACACCACCGCCCTGGTCCACGAGGCGTATCTCAAGCTCGTGGGCCAGGAGAATCCCCAGTGGCGAGATCGCGCCCATTTCACCGCCGTGGCCGCCACCGCGATGCGACACCTTCGGATCGACCATGCCCGTCGCGCTCATGCGGCGCGGCGCGGGGGGAAGCGGACCCGGCTCTCCCTGGACCAGATCGAACACTCTCTCGCCGCGACCCCGGAGGGCGTACCCGCAGCCGACGACCCCGAACTCCTGGTGCTCCTCGATGAGGCAATCCGGAATCTGGAACATGTCAACGAGCGTCAGGCGCGGATCGTGGAGTGTCGTTTCTTCGCGGAGATGACGGTTCCGGATACCGCGGCCGCGCTCTCCCTTTCGACGGCCACCGTCAAGCGCGGGTGGTCGATGGCACAGGCATGGCTCCACCGCGAAATGGAACGCATGCTGGCACAGGGGACGGCGGACGGAACCACATGA
PROTEIN sequence
Length: 210
MSDDSGQTTVTRLLRKLSAGDREALNALYPLVYDELRALARARRRHQGHSDTLNTTALVHEAYLKLVGQENPQWRDRAHFTAVAATAMRHLRIDHARRAHAARRGGKRTRLSLDQIEHSLAATPEGVPAADDPELLVLLDEAIRNLEHVNERQARIVECRFFAEMTVPDTAAALSLSTATVKRGWSMAQAWLHREMERMLAQGTADGTT*