ggKbase home page

bjp_ig2158_scaffold_1032_21

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(17056..18711)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 562.0
  • Bit_score: 519
  • Evalue 3.40e-144
  • rbh
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 574.0
  • Bit_score: 589
  • Evalue 5.00e-165
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 570.0
  • Bit_score: 545
  • Evalue 2.20e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1656
ATGTTAGCCTCTCTGCGGAACCGACTCATCCTGGTGGGGATCTTCATCCTCACCTCGATCTTCTACCTCTTCCCGCGGGATATCACGATCCGCGAAAGGGGACCTGACGGGGTCATGCGCGACGTGGCCGTGACCCGCGTCCCCCTGAAGCTGGGTCTCGATCTCCAGGGCGGCATGCACCTGGGCCTCGAGCTTGACCAGTCCGCCTCCGTCTCCGCCGACCCGGCCCGGGACATCGACCTTGCACTGACCGTGCTGCGGAAGCGGGTCGACGAGTTCGGCGTCACCGAGCCGGTGATCCAGAAGGTGGGTACCGAGCGAATCGTGGTCGAGCTCGCCGGTATCTCCGACCCGGCCCGGGCCAAGGCCATTGTCCAGCAGAGCGCCTTTCTCGAGTTCCAGATCACCGACAAGACCGCGGGACTGGAAAAGGCCCTCCCTGCCATGGACCGCGTCCTGCGAGGGCTGGGTGTGCAGGGAGGCGGGGCACCCGGAGGCCCCGGCCGTGAGGCCGTGACGTCCGCCGTGCAGGACCTGCTCGGCGGGGATTCCGCGGCCGCGACCGGTGACTCCGCCACGGCCCCCGGCGAAACCGGGCCCGCCGTGCTGAGCAACCTGATTCTCGGGTCGGGCACCGGTATCCCCGGGGAGTACATGGTCCCGGAATCGGCCTTCCCCCGGGTGGACAGCATGCTGGCCATCCCGGAGGTGCGGCGTCTGGTCCCGCGAGGCGTCGAACTCAAGTGGTCGAACCAGCCGATCGCCGTGGGAGTGGATACCTACCGGTTTCTCTATGCGCTCGAGGATCGGGCGATGATCGACGGGCGCAGCCTCACCGACGCCCAGGCCCAGATCGATCCGCTGACCAATGGCCCGATCGTCACCTTCACCCTCGATCGCGCCGGCGGGCGTCGCTTCGGTGTCGAGACCGCGCGGCACATCGGGGATTACATGGCGATTGTGCTGGATGACCGGGTTCAGGGACAACCACCGGTGATCCAGGGGCGGATCGACCGGAACGGTCAGATCACCCTCGGCAATCGCACGCTGCTGGAGGCGCAGGATCTGGCCCTGACTCTCAAGGCCGGTGCCTTGCCGGTGCCCCTCCAGATCGTGGAGGAACGGCAGGTCGGACCGAGTCTCGGTCAGGACTCCATCCGCCAGGGGATCACCGCCGGCGTGGTGGGGACGGTGCTCGTCATTCTGATCATGATCGGCTACTACCGGCTGAGCGGGGCGCTCGCCGTCCTGGCGCTGGGGCTCTACCTGTTGTTCACCCTTGGGGCCCTGAGCATGCTCGGCGCCACCCTCACGCTGCCGGGGCTGGCCGGCCTGGTCCTCTCCATCGGGATCGCGGTCGACGCCAATGTGCTGATCTTCGAGCGGATCCGCGAGGAGCTGATGCTCGGGAAAACCGTTCCCCTCTCCGTGGACGAGGGCTTCCGCCACGCGATGTCGGCGATCATCGACAGCAACGTGTCCACCGTCCTCACGGCCCTCTTCCTCTTCCAGTTCGGCACCGGCCCGGTGAAGGGCTTTGCGGTCACCCTGATCGTCGGGATCGCCGCCTCGCTGGTGACTGCCGTGTTCGTCACTCGCACGCTGTTCCAGATCTGGCTCCAGCGCCGACCCGCCCTGACCACACTGAGCATCTGA
PROTEIN sequence
Length: 552
MLASLRNRLILVGIFILTSIFYLFPRDITIRERGPDGVMRDVAVTRVPLKLGLDLQGGMHLGLELDQSASVSADPARDIDLALTVLRKRVDEFGVTEPVIQKVGTERIVVELAGISDPARAKAIVQQSAFLEFQITDKTAGLEKALPAMDRVLRGLGVQGGGAPGGPGREAVTSAVQDLLGGDSAAATGDSATAPGETGPAVLSNLILGSGTGIPGEYMVPESAFPRVDSMLAIPEVRRLVPRGVELKWSNQPIAVGVDTYRFLYALEDRAMIDGRSLTDAQAQIDPLTNGPIVTFTLDRAGGRRFGVETARHIGDYMAIVLDDRVQGQPPVIQGRIDRNGQITLGNRTLLEAQDLALTLKAGALPVPLQIVEERQVGPSLGQDSIRQGITAGVVGTVLVILIMIGYYRLSGALAVLALGLYLLFTLGALSMLGATLTLPGLAGLVLSIGIAVDANVLIFERIREELMLGKTVPLSVDEGFRHAMSAIIDSNVSTVLTALFLFQFGTGPVKGFAVTLIVGIAASLVTAVFVTRTLFQIWLQRRPALTTLSI*