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bjp_ig2158_scaffold_1032_24

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(19938..20501)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12555519 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 173.0
  • Bit_score: 156
  • Evalue 2.60e-35
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 173.0
  • Bit_score: 150
  • Evalue 2.60e-33
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 173.0
  • Bit_score: 145
  • Evalue 1.30e-32

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 564
GTGGCGCGCGTGAGGAAGACATACGGCATTCGGTCGGTCGGCCACGCTGGGACGCTGGATCCCTTCGCCACGGGGTTGCTGGTGGTCCTCACGGGTTCCGCGACCCGGTTGGCCCGGTTTGTGTCGGCGCAGTCGAAAACCTACGTCGCGGTGGCCCGGCTGGGACGCCGAACCGCCACGGACGATTGCACGGGAGAGATCCGCTCCGAGTCGGACGGCCCCTGGCCCACCGGCGCCGATGTCGCGGCGGTTCTCCAGGGAATGGTGGGGACGGGGTGGCAGCGCCCGCCGGCTTTCTCGGCGAAGCGGGTGGCCGGAGTGCGGAGCTATGCCCGGGCCCGGCAGGGAGAGGACGTGGTGCTGGAACCCGTCGAGGTGACGATCGAGGCGATGACGCTGGAAGAGTATGCCCCGCCCTTGGCGCAGTTTCGCTGCACCGTCTCCGCGGGGACGTATGTCCGGGCCATCGCCCGCGACCTGGGCGAGGCCGTGGGTCTGGGGGCGTCGCTCGATTCCCTGTCGGTTCGCTTCGGGTCGAGGACGCCATTCCCCTCGATGCCGTGA
PROTEIN sequence
Length: 188
VARVRKTYGIRSVGHAGTLDPFATGLLVVLTGSATRLARFVSAQSKTYVAVARLGRRTATDDCTGEIRSESDGPWPTGADVAAVLQGMVGTGWQRPPAFSAKRVAGVRSYARARQGEDVVLEPVEVTIEAMTLEEYAPPLAQFRCTVSAGTYVRAIARDLGEAVGLGASLDSLSVRFGSRTPFPSMP*