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bjp_ig2158_scaffold_2354_9

Organism: BJP_Ig2158_Hor_250_2014_Gemmatimonadetes_68_9

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(8497..9132)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=2 Tax=Labrenzia RepID=U7FQ66_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 116
  • Evalue 2.60e-23
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 208.0
  • Bit_score: 116
  • Evalue 1.20e-23
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:ERP87734.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 116
  • Evalue 3.60e-23

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Taxonomy

Labrenzia sp. C1B10 → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGCTAGCTGTGAGCCAACCGACTACGGACCGTAGCAGGAACGCAACACGTCGTTTTCTCTCGGTCGAGCGCGAATCGTCGATTCGAAAGCGACTCATCGCCCGGGATGAGAGGGCGCTGGTCGAATTGATCGATCTGGCCACCCCCTGGTTGCTTGGTGTGACGCAGTCGATGCTCTCGGATCCGGCCGAGGCGGAGGAAGTGGTGATGGAGTCGTTCCACGTGGCGTGGAATCGGATCGAGATCTCGCCGGACGCGGAAGGGGGCCTGATGCCGTGGCTCCTGCGGGTCACCCGGAACCGGGCGATTGACCGGCTGCGGTCTCAGCGGCGGCACGTGGTGAAGACCCGCCGGGCCGAGATCTATTCGGACATCGGTGATGCCATCACCCCGCCGGAGGAGCCGAATGAGGCGGGCCAGCCGGGTTGGCACGTGCATGAGAAGGTGCAGGCGGCGATGAAGGAACTTCCCCCGGAGCAGCAGAAGGCGGTCTATCTCGCCTTCTACCGGGGCCTCACGCATTCGGAGATTGCGGAGGAGCTGCAGATCCCGCTGGGCACCGTCAAGACCCGGCTTCGATTGGCCTTTGGCCGGTTGCGTGGTACCCTGGCCACCCTGAAGGAATGGATCGTATGA
PROTEIN sequence
Length: 212
MLAVSQPTTDRSRNATRRFLSVERESSIRKRLIARDERALVELIDLATPWLLGVTQSMLSDPAEAEEVVMESFHVAWNRIEISPDAEGGLMPWLLRVTRNRAIDRLRSQRRHVVKTRRAEIYSDIGDAITPPEEPNEAGQPGWHVHEKVQAAMKELPPEQQKAVYLAFYRGLTHSEIAEELQIPLGTVKTRLRLAFGRLRGTLATLKEWIV*