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bjp_ig2158_scaffold_6409_3

Organism: BJP_Ig2158_Hor_250_2014_Clostridiales_40_5

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1546..5031

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=555088 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 999.99
  • Bit_score: 1208
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIY9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 999.99
  • Bit_score: 1208
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 999.99
  • Bit_score: 1106
  • Evalue 0.0

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Taxonomy

Dethiobacter alkaliphilus → Dethiobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3486
ATGGCCAGCCAAAAATTGTTAGATTTAGTGTTTCAGGATAATGATTTTAAAAAAATTATCCGAAACATAGAAAACAGAATAAAAAGCCAGCTTATTTATGGTATAGACAAAAGCCAGAAGCACCTGCTGATGTCTGCGGTTAAGGCATTTACGGGACGGCCGGTTCTTATATTAACTACCGATCTTTCAAGGGCGGAAAAAATCTATGAAGACCTCATTAATTTTTCCCCGGCGGATAAACTTCTATTATTTCCGGCCAGGGAAAATATATTTTATGAAACTTTGACAGTCAGTAAAGAAATAACGGAACAGAGGATGATGGTTCTGGAGAAAGTGGTAAAGGAAAAGGATTTTACAGTCATAGCACCTGCAGCTGCTCTTTTTCCCCTGATCCCTCCGAAGGAAAACTGGGAAAATGCTTCATTAAAAATCAGGGTAAATGAGAATGTAAAGCTTGATATTCTGGTGAACCATCTGGCAGAAGCCGGTTACAAAAGGAATTCCCTGGTAGACGGTAGAGGACAGTTCAGTGTACGAGGAGGAATTTTAGATGTTTTCCCTGTAGTAAGGGATAACCCTGTAAGGGTTGAATTTTTCGGAGATGAGATTGAGTCTATAAGGGAATTTGACCCGGCCAACCAGAGGTCAAAAACTCGTCTGGAAGAAGCAGACTTATCTCCTGCACATGAAATTATCCTTGATAGAGGTGCTTTCCAGAGGGGGAAAGTAGAGGTAGAAAAAGATCTAGAGGAAAGAGTCTCCTTTTTGAAAAGGGCCAGGGAAAAGAAAACGGCCGATAAGCTCTTCCAAAAGGTTCAGAGTCATCTCGAAAAAATAAATGAGAGAATTTATTTTAACGGTATAGAACAGTACCTTCCCTATTTTTATACCAGACCACAAACCTTTTTGGACTATCTTCCGGAAGATACTCTAATATTTATTGACGAACCGGTTCACTTTTTAGAGAACAGCGAAAAGCTGTGGAAGGAAATTGAGGAAACAAATAATTCACTCCTCGGAGAAGGGTCCCTTATTCCCAGGCAGGCTGAGGTTTACCGGCCTGTTAAAGAGTTTGTTTTTAACAGCTCTTACCAGTACATTTCTTTTTCCCTTTTAATGCGTAAAGTTCCCTTATTCAGTCCACAGGATATTATAATTTTTAACAATAAAACAATGCCTACATTTTACGGTAAGTGGGAAGTCCTGAAAGAGGAAATAAGGCATTGGTTTAAGGAAGGCTATAAGGTCTGTATCATGACTTCTTCTCCTGAAAGAGCCGGAGAAATCGCTGCTTCTTGTGAAACGGAGAACATAGCTGCTGTCTATACTGAATTACTTGATGAACTCCCCCCTAAAACAGTAGGGGTAATTCTCTGTAATCTGGAAAACGGTTTTATTCTTCCGAAACTAAAAATAGCTCTTCTGACCGAACAGGAGATTATCTACAAGAGTAAGAAGAAAAAGTTTTGGAAAACTTCCCGGGAAGGCATAAGGATTTCAGACTATCACGATTTAGAGGTTGGAGATTATGTGGTTCATGAGCACCACGGCATAGGGCAGTACCTGGGAGTACGCACCTTAGAGATTAACACCCTGAATAAGGATTACCTGTATTTAAAATATGGAGGAGAAGATAAGCTCTTTATTCCTACAGATCAGATTGGTTTAATTAAAAAATATATTGGAGTTGAAGGGAAAAGGCCCAGGCTGCACGGTCTGGGAAGCAGTGAATGGGCCCGGGTTAAAAGCAGGGTTAAAGATTCAGTACAGAAGTTGGCGCGTGAGCTGCTTTCGCTTTATGCGGTTAGAAAGTCTGTTGAAGGTTATGCTTATTCTTCTGATCAAATCTGGCAGAGGGAGTTTGAAGCCCGCTTTCCCTATGAGGAAACTCCCGACCAGTTCAGGGCTATACAGGAAGTTAAGAAGGATATGGAAAAAAATAAACCTATGGACCGCTTATTATGCGGAGATGTGGGGTACGGCAAAACGGAGGTAGCTCTAAGGGCCGCCTTTAAGGCTGTATTGGATGGCAAACAGGCAGCCTTTCTGGTTCCAACTACCATTCTGGCCATGCAGCATTATCAGAATTTTAAAGAGAGGTTTGCAGGTTTTCCGGTAAATATCGAAGTCTTGAGCCGGTTTAAAAAACCCTCCGAACAAAAGGAAATTGTAAAACAGGTAAAAACAGGCTGGGTTGATATTATTATCGGGACTCACCGTCTCTTATCTTCCGATGTTCGTTTTAAGGATTTAGGGCTTTTAATTATTGATGAGGAACAGCGTTTTGGGGTGCGCCATAAGGAAAAGCTTAAAGTTATTCGTAAAAATGTAGATGTCATGGCTATGACGGCTACTCCGATTCCCAGGACACTTCATATGTCTTTAGTTGGAGTTAGGGACTTAAGCGTTATTGAAACACCTCCAGAAAACAGGTATCCTATTCAGACCTATGTAGTGGAATATTCGGATCAGGTAATTAAAGAGGCGATATTAAGGGAGTTGAACCGGGGTGGACAGGTATATTTTGTTTACAACCGGGTTGAAACTATTGAAAAATGGGGAGAACACCTTAAAAAGATGGTTCCAGAGGCACGTATAGCTATCGGTCACGGGCAGATGCCCGAATCCACGCTGGAGAAAGTGATGTGCGTTTTTCTTAACGGAGGTTATGATATACTTTTAAGCACCACTATTGTAGAAGCCGGATTGGATATACCCAATGTTAACACCATGATTATTTATGATGCGGATAAAATGGGCCTTTCTCAGTTATACCAGCTTCGCGGAAGAGTCGGAAGGTCTAACCGTCTGGCCTATGCTTACCTGGCTTATCAAAAGGATAAGGTCCTTTCTGAGGTAGCTGAAAAAAGACTTCAAGCCATAAAGGAATTTACGGAATTAGGTTCAGGTTTTAAAATTGCCTTAAGAGATTTAGAGATACGGGGTGCAGGAAATATTTTAGGGTCGGAGCAGCACGGTTTTATGATGGCTGTTGGTTTTGACCTGTACTGTCAGCTTCTCGAGCAGAGCATAAGAGAGCTTAAAGGTGTAAGAAAAATTGAAATCTCCGAATGTAAAATCGAGATAAATGTGGATGCTTATATACCTACTTCCTATATACAGCATCACAGCCAAAAAATTTCTATTTACCAAAAAATTGCAGCCATACAATCTTTGGAAGAAGCAGATGACCTGGTAAAAGAACTGAATGACCGTTACGGGCAGCTGCTCACCCCGGTTGAGAACCTGATTTCAGTAGCCCGTCTAAAAGTTTACGCCCGTATTTTACAAATTACGTCTATAGTTCAGGAAAAAGATCTGGTATTTTTTAAATTTACTCCTGAACTAAAGGTTAAAAGCGAAGAAATGCTCAGGTTTGCTAAAAGCTTTTCCGGAGATGTAAGCCTATCGGTAGGGAAACAGATTAGTCTTAAGGTGAGAGTAAAAGGAATGAGGGAAGGCTCCCTGCTTGACCGTCTTGAATCA
PROTEIN sequence
Length: 1162
MASQKLLDLVFQDNDFKKIIRNIENRIKSQLIYGIDKSQKHLLMSAVKAFTGRPVLILTTDLSRAEKIYEDLINFSPADKLLLFPARENIFYETLTVSKEITEQRMMVLEKVVKEKDFTVIAPAAALFPLIPPKENWENASLKIRVNENVKLDILVNHLAEAGYKRNSLVDGRGQFSVRGGILDVFPVVRDNPVRVEFFGDEIESIREFDPANQRSKTRLEEADLSPAHEIILDRGAFQRGKVEVEKDLEERVSFLKRAREKKTADKLFQKVQSHLEKINERIYFNGIEQYLPYFYTRPQTFLDYLPEDTLIFIDEPVHFLENSEKLWKEIEETNNSLLGEGSLIPRQAEVYRPVKEFVFNSSYQYISFSLLMRKVPLFSPQDIIIFNNKTMPTFYGKWEVLKEEIRHWFKEGYKVCIMTSSPERAGEIAASCETENIAAVYTELLDELPPKTVGVILCNLENGFILPKLKIALLTEQEIIYKSKKKKFWKTSREGIRISDYHDLEVGDYVVHEHHGIGQYLGVRTLEINTLNKDYLYLKYGGEDKLFIPTDQIGLIKKYIGVEGKRPRLHGLGSSEWARVKSRVKDSVQKLARELLSLYAVRKSVEGYAYSSDQIWQREFEARFPYEETPDQFRAIQEVKKDMEKNKPMDRLLCGDVGYGKTEVALRAAFKAVLDGKQAAFLVPTTILAMQHYQNFKERFAGFPVNIEVLSRFKKPSEQKEIVKQVKTGWVDIIIGTHRLLSSDVRFKDLGLLIIDEEQRFGVRHKEKLKVIRKNVDVMAMTATPIPRTLHMSLVGVRDLSVIETPPENRYPIQTYVVEYSDQVIKEAILRELNRGGQVYFVYNRVETIEKWGEHLKKMVPEARIAIGHGQMPESTLEKVMCVFLNGGYDILLSTTIVEAGLDIPNVNTMIIYDADKMGLSQLYQLRGRVGRSNRLAYAYLAYQKDKVLSEVAEKRLQAIKEFTELGSGFKIALRDLEIRGAGNILGSEQHGFMMAVGFDLYCQLLEQSIRELKGVRKIEISECKIEINVDAYIPTSYIQHHSQKISIYQKIAAIQSLEEADDLVKELNDRYGQLLTPVENLISVARLKVYARILQITSIVQEKDLVFFKFTPELKVKSEEMLRFAKSFSGDVSLSVGKQISLKVRVKGMREGSLLDRLES