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bjp_ig2158_scaffold_14619_2

Organism: BJP_Ig2158_Hor_250_2014_Clostridiales_40_5

partial RP 37 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(272..505)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDR3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 75.0
  • Bit_score: 129
  • Evalue 1.40e-27
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 75.0
  • Bit_score: 129
  • Evalue 2.00e-27
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 72.0
  • Bit_score: 112
  • Evalue 5.00e-23

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Taxonomy

Dethiobacter alkaliphilus → Dethiobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 234
ATGACAAAGGGACCTGTTAATTTACAGGATAATTTTCTAAATCAAGCCAGAAAAGAAAATATGTTTATGACCATCTTTCTGGTTAACGGATATCAGATAAAGGGAACCGTAAAAAGTTTTGACAACTTCACTATTCTTTTAGAGGTAGAAGGTAAGCAGCAGCTTGTCTATAAGCACGCCGTTTCGACCATAATACCGCTTAAAAATATAAATTTGAATTTTACGGATAATTAA
PROTEIN sequence
Length: 78
MTKGPVNLQDNFLNQARKENMFMTIFLVNGYQIKGTVKSFDNFTILLEVEGKQQLVYKHAVSTIIPLKNINLNFTDN*