ggKbase home page

bjp_ig2158_scaffold_22534_1

Organism: BJP_Ig2158_Hor_250_2014_Sphingomonadales_66_8

near complete RP 50 / 55 BSCG 48 / 51 ASCG 10 / 38
Location: 3..611

Top 3 Functional Annotations

Value Algorithm Source
IncF plasmid conjugative transfer pilus assembly protein TraE n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJZ1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 202.0
  • Bit_score: 389
  • Evalue 2.00e-105
  • rbh
IncF plasmid conjugative transfer pilus assembly protein TraE {ECO:0000313|EMBL:CCW15982.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 202.0
  • Bit_score: 389
  • Evalue 2.80e-105
TraE family protein similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 206.0
  • Bit_score: 357
  • Evalue 3.10e-96
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GACCTCTTGATTTCTCACGGCCAGGCGCAGCGGCTCCTGAAGCAACGCAACCTGCTGGCCATCACAGCGACCGGGCTGTTTGCCTTAAGCGTCGTGCTGACGCTGACCGCCGCGCGCCGCGACCGCGAGGTCGTGCTGCAGCCGGTGCTCGCCAAGCCGCTGACGCTGTCATCGAGCCATGTCGACAAGGACTACCTCGAGCTGGTCACTCGCGATGCCGCGCTGCTGACGCTCAACCGTTCGCCTTCGAACCTGCAATATTGGATGGATTCGATCCTCGAAATCACCGATCCCAGAACCCACGGCCGGATGAAGGCCGAGCTGATGAAGATCTTCAACGAGCAGAACGGCTCGAATGTCTCGCAGTTCTTCACGATCGAGAACCTCTCCGTCGATCCCGATGCGCTGACCAGCGAAGTGAATGGCGTGCTGCACACGGTTGTCGGCTCGAAGGAAGTCACCTCCGAAGCCCGGACCTTCCGTTACGTGTGGAGCTACTCGGGCGTCAGCCTGAAGCTCGCCGGGTTCGGGCGCATCACCAAGGACGCCGCGGGCAAAGTCATCGGACGCGCCAGCGCCAACAACAGCACCGATGGGGGAGACGAGTGA
PROTEIN sequence
Length: 203
DLLISHGQAQRLLKQRNLLAITATGLFALSVVLTLTAARRDREVVLQPVLAKPLTLSSSHVDKDYLELVTRDAALLTLNRSPSNLQYWMDSILEITDPRTHGRMKAELMKIFNEQNGSNVSQFFTIENLSVDPDALTSEVNGVLHTVVGSKEVTSEARTFRYVWSYSGVSLKLAGFGRITKDAAGKVIGRASANNSTDGGDE*