ggKbase home page

bjp_ig2158_scaffold_5392_2

Organism: BJP_Ig2158_Hor_250_2014_Bacteroidetes_37_5_partial

partial RP 36 / 55 MC: 4 BSCG 34 / 51 MC: 2 ASCG 5 / 38
Location: 515..1618

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CC92 similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 368.0
  • Bit_score: 462
  • Evalue 5.70e-127
  • rbh
ATP-dependent RNA helicase {ECO:0000313|EMBL:GAO30261.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 155 similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 366.0
  • Bit_score: 444
  • Evalue 1.70e-121
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 365.0
  • Bit_score: 421
  • Evalue 2.40e-115

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1104
ATGGATGGCATAGAGGCTATGGGATTTGTCGATCCCACTCCAGTTCAACAGCAGGCAATTGGTCCCATTATGGAGGGTAAAGATGTAATTGCTTGTGCCCAAACAGGGACAGGTAAAACAGCAGCATTTATTCTACCTATAATCAATAAGTTGAGTTCATTACCCATGAAGCTCAACTATACAAGTACACTTGTAATTGTACCCACAAGGGAATTGGCGCAACAAATTGATCAGCAGCTCGAAGGCTTTGGTTATTATGCACCAGTTAGCTCGGTAGCTGTATACGGAGGAAACGATAGCACAACATGGGAAAATCAGCGATTGGCCATACAGAATGGAGTCGATTTTATTATTGCCACTCCCGGAAGGCTGATTCAGCATATAAAAATGGGTTATGTATCGTTGAATAGGGTGGAGCATCTTGTTCTCGATGAGGCAGATAGAATGCTTGACATGGGTTTTTTTGATGACATAATGGAGATTCTTAAGCTTCTTCCTACCAAGCGACAAACTCTTCTTTTCTCTGCAACAATGCCACCTACTATTCGGAAGCTCTCAAAAAAAATTCTGAATAAACCCATCGAGATCAGCATTTCAGTTTCCAAACCTGCCGAGAATGTTCTTCAGGCTGCCTATGAAGTGGAGGAGTCGCAAAAAATTGCTTTGCTTTCTCATCTTTTAAAGGGTAAAGATCATGTTAAGAGCGCAATAGTATTTGCCTCCACTAAGATTAAGGTGAAGAGCATAGAGCGATCATTATTTGCTGAAGGATTAGCCGTTAGGGCCATTCACTCCGATTTGGAGCAGAAAGAACGAGAAGATGTACTTCGTCAGTTTAAAAACAGGAACTTTCAACTCCTTGTGGCCACCGATATAATTTCCAGAGGTATTGATATTGAGGATATTGATCTAATTGTAAACTTCGATGTTCCCAATGATCCAGAGGACTATGTTCATCGAATTGGCCGAACAGCACGTGCTCAGGCCGATGGTGTTGCTCTTACTTTTATCAACGGAAAAGAGAGGAGTCATTTTAAGCAGATCGAGACTTTTATCGACAGCAATATTTTTAGAATTCCCCTTCCGCAAAATCTAAGAAATTAA
PROTEIN sequence
Length: 368
MDGIEAMGFVDPTPVQQQAIGPIMEGKDVIACAQTGTGKTAAFILPIINKLSSLPMKLNYTSTLVIVPTRELAQQIDQQLEGFGYYAPVSSVAVYGGNDSTTWENQRLAIQNGVDFIIATPGRLIQHIKMGYVSLNRVEHLVLDEADRMLDMGFFDDIMEILKLLPTKRQTLLFSATMPPTIRKLSKKILNKPIEISISVSKPAENVLQAAYEVEESQKIALLSHLLKGKDHVKSAIVFASTKIKVKSIERSLFAEGLAVRAIHSDLEQKEREDVLRQFKNRNFQLLVATDIISRGIDIEDIDLIVNFDVPNDPEDYVHRIGRTARAQADGVALTFINGKERSHFKQIETFIDSNIFRIPLPQNLRN*