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bjp_ig2158_scaffold_7974_1

Organism: BJP_Ig2158_Hor_250_2014_Bacteroidetes_37_5_partial

partial RP 36 / 55 MC: 4 BSCG 34 / 51 MC: 2 ASCG 5 / 38
Location: 94..558

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif {ECO:0000313|EMBL:GAO30662.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.; similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 154.0
  • Bit_score: 268
  • Evalue 5.40e-69
Putative transcription regulator with HTH domain id=3071313 bin=GWF2_Bacteroidetes_49_14 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 106.0
  • Bit_score: 134
  • Evalue 8.70e-29
plasmid stabilization protein similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 162.0
  • Bit_score: 121
  • Evalue 2.10e-25

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAAAACTAAAATTATAAAGACAGAACAAGAATATAACGAAGCTTGCGAGCGTATTTACACCTTGATTAATCAGAACGAAAAGCCTATAGAGCCTGACAGTCGTGAAGGTGAAGAAATGGAACTTTTATCATTGCTTGTCGAAAAGTATGAGCAAGAACATTATTCGATAGCTGCGCCAAACCCGATTGAAGCGATCAAGTTTAGAATGGAACAAATGAACTTGAAACAGGCTGATGTAGCACCGTTGTTTGGTGGGGAAACAAGAGTATCAGAGGTTTTGCACGGTAAGCGTCCATTAACTTTAAAAATGATAACCCTATTAAACAGATACTTAGGAATACCTTTAGAATCCTTAGTTGCTGGAAATAAAGAAGTGAAGTTGGACCCAGAAAAAAGAGATAAACTTCTAAGGATAGAATCTATTAGAGAATACTTTTCAGGTTCCAGAGCAGCAACGATTTAA
PROTEIN sequence
Length: 155
MKTKIIKTEQEYNEACERIYTLINQNEKPIEPDSREGEEMELLSLLVEKYEQEHYSIAAPNPIEAIKFRMEQMNLKQADVAPLFGGETRVSEVLHGKRPLTLKMITLLNRYLGIPLESLVAGNKEVKLDPEKRDKLLRIESIREYFSGSRAATI*