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bjp_ig2158_scaffold_16916_3

Organism: BJP_Ig2158_Hor_250_2014_Bacteroidetes_37_5_partial

partial RP 36 / 55 MC: 4 BSCG 34 / 51 MC: 2 ASCG 5 / 38
Location: comp(1104..2159)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.; similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 351.0
  • Bit_score: 448
  • Evalue 8.70e-123
RNA-splicing ligase RtcB n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EKF3_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 351.0
  • Bit_score: 448
  • Evalue 6.20e-123
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 351.0
  • Bit_score: 448
  • Evalue 1.70e-123

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1056
GGGTATGGCCTACCCATTGGAGGCGTACTTGCAACAAATGAAAACATAGTGATTCCCTACGCTGTTGGAGTTGATATTGCTTGCAGAATGTGTATGTCGGTTTATAATATTGAGTCGAGCAAAATTGACAATTTGCGATTTAAACTAAAGGATTTACTGGGAAACCATACAATATTCGGGGTAGGTTCTAAGAATAATAATCATCTAAATTCTGAAGTTTTCGATAGATCGGAATGGAAAGCAACAGAGTTTATTCGTAAGCATAGAGATTTAGCCTACAGCCAATTGGGTACATCTGGTGCAGGTAACCACTTTGTGGAATGGGGCGAGCTAAAAGTGCTTAAGGATGCTCCTGAAATCAACCTAATGGTTGGCGATTATGTTGCATTGCTTTCGCACTCAGGCTCCCGTGGATTTGGTAACGAGGTGGCAACCTACTACTCAAAAGTGGCAATGAGCAAAATCAGTTTACCCAAGGAGGCAAAGCATCTGGCGTGGTTAGATCTAAAAACCACGGAGGGAATGGAGTACTGGATTGCCATGAATCTTGCGGGTGAGTATGCCTCGGCAAATCATCATGAAATACATGGGAAAATTGCTAAAGATTTTGGTAGAACGCCAATTGCAAAGATTGAAAACCATCATAATTTCGCATGGAAAGAGAAACTGAGCGATGGCAAATCTGCGGTGGTACACCGCAAAGGAGCAACTCCTGCAGGAAAAGGAGTAATTGGAATTATCCCAGGCTCAATGACACACCCAGGTTTTATTGTAAGAGGAAAAGGGAATATTGAGTCAATTAACTCAGCATCACACGGTGCTGGTCGAAGCATGTCACGTTCGCAAGCCCTAAAAAATTTCGTGCAAAAAGATTTGATTGATGTACTACAAAAACATGGCGTAGAACTAATTGGCGGCGATATTGACGAGATTCCAATGGCCTATAAAAACATTGAAACTGTAATGAAAAATCAGGCTGAATTGGTAGAGATCATTGCGGTTTTCCAACCCCGAATTGTTAGAATGGCCGATGCCGAAAGGAGGAGAAGAAAGTAG
PROTEIN sequence
Length: 352
GYGLPIGGVLATNENIVIPYAVGVDIACRMCMSVYNIESSKIDNLRFKLKDLLGNHTIFGVGSKNNNHLNSEVFDRSEWKATEFIRKHRDLAYSQLGTSGAGNHFVEWGELKVLKDAPEINLMVGDYVALLSHSGSRGFGNEVATYYSKVAMSKISLPKEAKHLAWLDLKTTEGMEYWIAMNLAGEYASANHHEIHGKIAKDFGRTPIAKIENHHNFAWKEKLSDGKSAVVHRKGATPAGKGVIGIIPGSMTHPGFIVRGKGNIESINSASHGAGRSMSRSQALKNFVQKDLIDVLQKHGVELIGGDIDEIPMAYKNIETVMKNQAELVEIIAVFQPRIVRMADAERRRRK*