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gwa2_scaffold_4255_23

Organism: GWA2_PER_43_8

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 25425..26108

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70, RNA polymerase primary sigma factor {ECO:0000313|EMBL:KKT02371.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 227.0
  • Bit_score: 445
  • Evalue 6.20e-122
sigA; RNA polymerase major sigma-43 factor (sigma-A) KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 226.0
  • Bit_score: 312
  • Evalue 9.70e-83
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 315
  • Evalue 1.00e+00

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Taxonomy

PER_GWF2_43_17 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 684
TTGAGACTTGTTGTCAGTATTGCGAAAAAATACATTGGTAGAGGTCTTTCTTTTTTGGATCTTATACAAGAAGGAAATATAGGTTTGTTCAGGGCTGTTGAAAAGTTTGATCCGGACAGAGGTTTTAAGTTTTCAACTTATGCAACTTGGTGGATTAGGCAGGCGATTACTCGCGCCATTGCCGATCAAGCCAGGACGATTCGTATTCCGGTCCACATGGTTGAGACTATCAACAAGCTTACGCATACGCAAAGAAGGCTTGTACAAGAGCTTGGTCGTGAGCCTTTGATCGAAGAGTTGGCGGCTGAAATGAGTATGGATATCAAGAAGGTTCGACATGTTTTGAAAATTTCTCAGGATATAGTTTCTTTGGAGGCTCCGGTTGGTGCCGAAGAAGATAGTAAGCTTGGAGATTTTATTGAAGATGACGACGCGCTTTCTCCGGCGGATTTAACAAATAAGCAGTTAATTAAGGAAAATATTCATGATATGCTTCAATATCTTTCTCCTCGTGAGAGAAAGATTATTGAGATGAGATTCGGGCTTAAAGATGGTATCGGCCACACTCTTGAAGAGGTTGGGAAGGAGTTTGGTGTTACAAGAGAAAGAATTAGACAAATTGAAGCGAAAGTTCTTCAGAAACTTCGCGAGCATCCGACCAGCGTTCGTATAAAAGACAACTAA
PROTEIN sequence
Length: 228
LRLVVSIAKKYIGRGLSFLDLIQEGNIGLFRAVEKFDPDRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLTHTQRRLVQELGREPLIEELAAEMSMDIKKVRHVLKISQDIVSLEAPVGAEEDSKLGDFIEDDDALSPADLTNKQLIKENIHDMLQYLSPRERKIIEMRFGLKDGIGHTLEEVGKEFGVTRERIRQIEAKVLQKLREHPTSVRIKDN*