ggKbase home page

gwa2_scaffold_2452_17

Organism: GWA2_OD1_49_16_partial

partial RP 33 / 55 MC: 3 BSCG 34 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: comp(16359..17660)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWA1_OD1_47_8 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 433.0
  • Bit_score: 838
  • Evalue 4.80e-240
RpoD subfamily RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 419.0
  • Bit_score: 367
  • Evalue 6.30e-99
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 365
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_OD1_47_8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGAAGAAAAAAACAACTACAAAAAAAATAGTGTCCCACAAAAAACCTGCAAAAAAGAGGTCTATGACGAGCGTGCGCCCCGCGGCAAAAAAAACGGCAAAAAAAGTCAAAGCCAAAAGTACCACAAAAAAGAAAGTCCTTATCAAAAAGGCGGTTAAGAAAGCAGTACACAAGCCAGTCGCAAAGACTTCGGCAAAGAAAGTGGTAAAAAATTTAATACGAAAGAAATCAACAGAAGGCTGGGAAGAAAAAGCAACACGCCTCATCGCAAAAGGCCGCGGCCGTGGGTTCATCACCTACAATGAGATATTGAAGGAGTTTCCTGCGATTGAGCAAGACGTCATCTTCCTTGATAAGCTTTATGAAAAACTTGGCGATGCGGGAGTGGATATCCTCGAGGGCGGCGGACTCCTCGAGCTTGATGTGGTGGATCAGATTGCGCACAAAAAATACGTATACAAAAGCGGGGATTCTTCGTACGATTCGATCCAGATCTATCTCCGCGAGATAGGGCAATACCCCCTCTTGTCGGCACAAGAAGAACGTGATCTTGCCAAGCGGATCCAGGTCGGCGAAGAAGAGGCGAAAAATCTACTCGCGCGCGCAAACCTCCGCCTCGTGGTGTCTATTGCCAAGAAATACGTAGGCAGGAGCGCTGACCTCACCCTCCTCGACCTCATCCAAGAGGGTAACCTCGGGCTTTTCAAAGCGGTGGAGAAGTTTGAGTGGGAAAAGGGGTACAAGTTCTCGACCTATGCGACATGGTGGATTAGACAGGCGATTACGCGTGCACTCGCTGACCAATCGCGCACGATTCGTATTCCGGTGCACATGGTGGAAACGATTTCCAAGTATAAGCAAGTAGTGCGGAGACTCTCGCAAGACCTCGGTCGCGAGCCGCTTCCCGATGAAGTAGCGACCGAAATGGGGCTTGAGGTGGAAAAGATTTACAATATCAAAAACATCGATCAGGATACCGTGTCTCTCGAAAAGCCGATTGGCGACGACGACGACAAATCAACACTCGGCGAGTTTATTGCCGATGACAAGATCCTCGCACCCGATACCGAGTCTTCCCAACGCATTCTCTCCGATCAGGTCAAAGAGATCCTCGACGATCTTTCGGAAAAGGAGCGCAAGATTCTCGAAATGCGGCACGGTCTCGTGAACGGCGTCGTACACACGCTCGAAGAAGTGGGGAAGGAGTTCGGGGTGACGCGCGAGCGTATCCGCCAGATCGAAGCGAAAGCGATCGAAAAGATCCGCGCGCATGATAAGGTGGATAAGTTGCGGAATTACTGA
PROTEIN sequence
Length: 434
MKKKTTTKKIVSHKKPAKKRSMTSVRPAAKKTAKKVKAKSTTKKKVLIKKAVKKAVHKPVAKTSAKKVVKNLIRKKSTEGWEEKATRLIAKGRGRGFITYNEILKEFPAIEQDVIFLDKLYEKLGDAGVDILEGGGLLELDVVDQIAHKKYVYKSGDSSYDSIQIYLREIGQYPLLSAQEERDLAKRIQVGEEEAKNLLARANLRLVVSIAKKYVGRSADLTLLDLIQEGNLGLFKAVEKFEWEKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYKQVVRRLSQDLGREPLPDEVATEMGLEVEKIYNIKNIDQDTVSLEKPIGDDDDKSTLGEFIADDKILAPDTESSQRILSDQVKEILDDLSEKERKILEMRHGLVNGVVHTLEEVGKEFGVTRERIRQIEAKAIEKIRAHDKVDKLRNY*