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rifcsplowo2_01_scaffold_4943_4

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_43_24

near complete RP 35 / 55 MC: 4 BSCG 18 / 51 MC: 1 ASCG 31 / 38 MC: 2
Location: 2808..3347

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTX7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 168.0
  • Bit_score: 97
  • Evalue 1.40e-17
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=AR6 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 369
  • Evalue 2.60e-99
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 180.0
  • Bit_score: 94
  • Evalue 3.30e-17

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Taxonomy

AR6 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 540
ATGCAATCCCAATATTATTCTAACGGGAAACCAGCCTCGGCTCAACTTAATCTTGAGCGGTATCGAGATGGATTACTTAGATATCTGTCGAAGCTTACTGGGGACAGGGAGGATGCAGAAGACCTTACACAGGAAACCTTTCTTCGTGCCATCAAGAACGCACATACTTTAAGGGATGAGGGAAGCATTAAGCGCTGGCTTTATAGGATAGCCACTAATTTAAGCAACTCCAGGTGCAGAGACCGCGCTAAACATCCTTTAATTCTCTCTTGTGATCTAAATGGTTACGGGTATGGAGAGCTGGATAATGAGTATCCCGGTAATGGAGTGGATAACAGGGGGCATTTAGAGGAGAGAATCTGTGCAGAATCATACCTTCCTTTGATACCGGGCAAGTATAGTGCCCCCCTTAAATTAAACTCTCTTGGATTTTCATACGATGAGATAGCGGAAGAGCTCTCGATTCCTGTGGGGACTGTCAAGTCCAGGATATGGCGTGGCAGAAATCTCACTAACTCTTTGTTAAATGGCAGGTGTTAG
PROTEIN sequence
Length: 180
MQSQYYSNGKPASAQLNLERYRDGLLRYLSKLTGDREDAEDLTQETFLRAIKNAHTLRDEGSIKRWLYRIATNLSNSRCRDRAKHPLILSCDLNGYGYGELDNEYPGNGVDNRGHLEERICAESYLPLIPGKYSAPLKLNSLGFSYDEIAEELSIPVGTVKSRIWRGRNLTNSLLNGRC*