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rifcsplowo2_01_scaffold_32079_2

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_37_9

partial RP 27 / 55 MC: 7 BSCG 15 / 51 MC: 1 ASCG 27 / 38
Location: comp(558..1373)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA-processing protein RRP42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=CG_Pacearch_03 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 271.0
  • Bit_score: 368
  • Evalue 8.80e-99
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285 similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 262.0
  • Bit_score: 224
  • Evalue 1.10e-55
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 260.0
  • Bit_score: 212
  • Evalue 1.20e-52

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Taxonomy

CG_Pacearch_03 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 816
ATGAGCGCCATGGAATGTTCCAATATGACTAAAGAAACCTTGGATAGGATGTTTACCGAAGGAAAAAGGTTTGATGGAAGAGGATTATTGGACTATCGACCTATAGAAATTTCATTTGATGTTTCTAATAAAGCAGAAGGCAGCGCAAGAGTTAAGATTGGCAAGACAGAAGTGATTGTAGGTGTGAAGATGGTGGTGGGCGAGCCTTATCCAGATTCTCCAGATAAAGGCAATCTTACAGTCTCAGGGGATTTATTGCCTATGGCCTCCCCAAGATTTGAATCAGGGCCTCCAAAGTTCAACGCTATAGAGTTGCCTCGTTTAGTTGACCGTGCAATCAGGCATTCAGGCATCTTGGATTTGAAAGAATTGGTAATAACTTCTGGGGAAAAAGTCTGGATAGTCATAATCGATATTTATCCAATCAATGATGATGGCAATATAATTGATGCAGCCACAATCGGCGCAACAGCTGCCCTTAGGAAGACAATGATTCCTGTTTTGGATGAGAAGGGCGGAATAGACTATCATAAAAAGTCAAAAACACCTCTATCAATCGCTAAAGACATTTTTCCCATGATAATCACTTTCTTTAAGCTCGGAGATTCGGTGCTTTTGGACCCAACTCGTGAAGAGCAGGAAGCCTGTGAAGCAAGAATTGCATGGGGTATCTCCAAGTGGGAAGGTCAGCACATGATAAATTCCTGTCAGAAAGGAGAAGAATTAGCTTTTACAAGAAGTGATGTGGAAAGTATGATGGATCTCATTCCTAAGAAATTCGATGAGGTAAGCGAAAAGCTTAAAAAGTTTTTTTAG
PROTEIN sequence
Length: 272
MSAMECSNMTKETLDRMFTEGKRFDGRGLLDYRPIEISFDVSNKAEGSARVKIGKTEVIVGVKMVVGEPYPDSPDKGNLTVSGDLLPMASPRFESGPPKFNAIELPRLVDRAIRHSGILDLKELVITSGEKVWIVIIDIYPINDDGNIIDAATIGATAALRKTMIPVLDEKGGIDYHKKSKTPLSIAKDIFPMIITFFKLGDSVLLDPTREEQEACEARIAWGISKWEGQHMINSCQKGEELAFTRSDVESMMDLIPKKFDEVSEKLKKFF*