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rifcsplowo2_01_scaffold_46405_5

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_37_9

partial RP 27 / 55 MC: 7 BSCG 15 / 51 MC: 1 ASCG 27 / 38
Location: comp(2981..3511)

Top 3 Functional Annotations

Value Algorithm Source
RNA-processing protein; K06961 ribosomal RNA assembly protein Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 164.0
  • Bit_score: 176
  • Evalue 3.20e-41
KH domain protein id=5799968 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 183.0
  • Bit_score: 86
  • Evalue 4.10e-14
KH domain protein similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 173.0
  • Bit_score: 73
  • Evalue 5.90e-11

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 531
ATGGAAACGCTATTCTTTAACAGAACATCTGAATTGAAGAAAGAAATAAGAAACATAGAGAAAGCTCTAAATGTCAAATTAACTCTTAAAGGAAAGAAGCTGGAAGTAGAAGGAGATTCATTCGCAGAATATGATGCCTTGAGAATCTTAGAGGCTATGCAGTTCGGCTTCTCCGCAAAAAAGACCCTGCTCCTCACAGAGGAAGACATGATTTTCAGGACTCTCCCTATAAAGCATTTTACAAGAAGAAAAGACCTTTCTGAAGTTCGGGGCAGGATAATTGGTAAAGAGGGAAAGACAAAAAGAACAATTGAAGAAATATCTGGATGCAACTTGCATATCAACGAGGAGAATAACCAGGTAGGTATAATAGGGGATGCAGAAGAAATCGAAGAAGCAACAACTGCCCTAACCAACCTTATTAGAGGTTCAAAGCAGGCAAATGTTTATCGGTTCCTGGAAAGAATCAATACCGAAAGAAAGATAAATAAAACAGACTTAGGGTTAAAGAACAGCAAAGATGAAGAATAA
PROTEIN sequence
Length: 177
METLFFNRTSELKKEIRNIEKALNVKLTLKGKKLEVEGDSFAEYDALRILEAMQFGFSAKKTLLLTEEDMIFRTLPIKHFTRRKDLSEVRGRIIGKEGKTKRTIEEISGCNLHINEENNQVGIIGDAEEIEEATTALTNLIRGSKQANVYRFLERINTERKINKTDLGLKNSKDEE*