ggKbase home page

rifcsplowo2_01_scaffold_4795_23

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_81

near complete RP 37 / 55 MC: 7 BSCG 7 / 51 ASCG 35 / 38 MC: 2
Location: 19561..20238

Top 3 Functional Annotations

Value Algorithm Source
fibrillarin Tax=CG_Woesearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 222.0
  • Bit_score: 284
  • Evalue 1.10e-73
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5048460 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 224.0
  • Bit_score: 259
  • Evalue 2.60e-66
fibrillarin similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 223.0
  • Bit_score: 226
  • Evalue 9.10e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 678
ATGGCTAAAATCCAAAAGTCAAAAATCTTCGAGGTTTATGAAGCGGAAGAAGAAAAGAGAAAACTGCTTTATACAATAAATTTGACTCCAGAAGTAAAAGTGTATGACGAAATCCTTACAAAACAAGATAATATTGAATACAGGAGATGGGATCCTTACAGCAGCAAATTAGCCGCATTAATATTAAAAGGGTGCCCGAACATCGGCTTTAGAAAAAATGATATTGTTTTATACCTTGGAAGTGCCTCAGGCACAACGGTAAGCCATGTTTCAGATATTGTTGGCAAAGAAGGCTTTGTATTTGCCGTTGACATTGCACCAAGAGTCATGCGCGATTTGGTTTTTGTCTGCGAGGAAAGGAAAAACATTGCTCCTATACTTGCTGATGCCAACAGGCCGGAAAGTTTTGCTGATAGGGCATGCGAGGTTGATATTATTTATCAGGACATCGCGCAGAAAAACCAGGTTGAGATTTTTTTGAAGAATATTAAATTATTTTTAAAAAACAATGGGTATGCCTTATTGGCAGTAAAGGCAAGAAGCATCGATGTTACAAAAAATCCGAAAGATATCTTCAAAGAGGTAAAGAAGGTGCTGGAAAAAAGCCTGACTATAATTGATTTCAGGCCTCTGGAGCCTTTTCAAAAAGACCATTGCATGTTTGTTTGCAAGAAGTGA
PROTEIN sequence
Length: 226
MAKIQKSKIFEVYEAEEEKRKLLYTINLTPEVKVYDEILTKQDNIEYRRWDPYSSKLAALILKGCPNIGFRKNDIVLYLGSASGTTVSHVSDIVGKEGFVFAVDIAPRVMRDLVFVCEERKNIAPILADANRPESFADRACEVDIIYQDIAQKNQVEIFLKNIKLFLKNNGYALLAVKARSIDVTKNPKDIFKEVKKVLEKSLTIIDFRPLEPFQKDHCMFVCKK*