ggKbase home page

rifcsplowo2_01_scaffold_9623_3

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_38_81

near complete RP 37 / 55 MC: 7 BSCG 7 / 51 ASCG 35 / 38 MC: 2
Location: 2328..2879

Top 3 Functional Annotations

Value Algorithm Source
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 175.0
  • Bit_score: 301
  • Evalue 4.90e-79
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 175.0
  • Bit_score: 301
  • Evalue 6.90e-79
TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 182.0
  • Bit_score: 249
  • Evalue 8.10e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 552
ATGTCTAAAAAAACTGCTAGAGATATAAAAGTAGTCAACATAGTTGTTTCTACTTCATTGGAGCATGACATTCCATTGGAAAAGATGGCTGCTACATTGAGCAATACAGAGTATAATCCGGAGCAGTTTCCCGGGCTCGTAATAAGGATAAAAGACCCAAAAACGAGCGCTCTTATCTTCTCAAGCGGCAAGGTTGTATGCACTGGCGCAAGAAGCATGGAAAAAGTCCATGAAAGCATAAAAAAGATAATAAAAAGCCTGGAGAAGATAGGAATCAGAATAAAGATAAAGCCTGAAGTCAAGATACAGAACATAGTGGCTTCCGGCAGCGTTGGGATGGACCTTAATCTTAATGTTCTTGCAACCAAGCTTCAGAATGTTGAGTACGAGCCTGAGCAGTTTCCTGGGCTGGTTTATAAGCTTTTAGCTGCCAAGGCGACATTTTTGCTGTTCAGCAATGGAAAGATTGTTTGTACTGGGACAAAAAGCGAAAAGGAAGTTCACGCAGCTTTGGATAAGCTGATTGAGAACTTAAAGAAAGTCAAGGCTTAA
PROTEIN sequence
Length: 184
MSKKTARDIKVVNIVVSTSLEHDIPLEKMAATLSNTEYNPEQFPGLVIRIKDPKTSALIFSSGKVVCTGARSMEKVHESIKKIIKSLEKIGIRIKIKPEVKIQNIVASGSVGMDLNLNVLATKLQNVEYEPEQFPGLVYKLLAAKATFLLFSNGKIVCTGTKSEKEVHAALDKLIENLKKVKA*