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rifcsplowo2_01_scaffold_26533_3

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_35_20

near complete RP 36 / 55 MC: 6 BSCG 7 / 51 ASCG 33 / 38 MC: 2
Location: comp(1818..2369)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Serinicoccus marinus RepID=UPI0003B3DAED similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 163.0
  • Bit_score: 87
  • Evalue 1.90e-14
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 149.0
  • Bit_score: 57
  • Evalue 3.90e-06

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Taxonomy

Lachnospiraceae bacterium 28-4 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
ATGCTAACGGAAACATTTAGTGGAAGGAGACCAGAAGGGTATGAAAGGGTAGAAGAACTTAGACCATTCGTTTATAATTTTGCGAGAAAGCTTACAGGAGACCCTGTTCTAGCGGAAGACATTGCTCAAGAAGCTTTGATCAGTGCTTGGCGCTCTTATGACAGTATTAGGACTGCAAATTTAAAATCCTGGCTTGGAAGCATTGTTTTAAACAAAGTGAGACAATACAATAGAGTTAAGAAAAACAAAGTTTCAACAGTTGAAATAAGCCCGAACCTGGCTGATGGCTTTGATTTGGAATCAACGATTGAAAAACATACCACTTTAAATACAATTTCAAGAGCAGTGGACGCATTGCCACTAGATTATAGAGTTCCTTTGCTTTTGTGGATGGATGATGTTCCTTTTGAAGAGATTGCTAAATTTTATGGATTGAAAAATCCTACCGCAAAAACAAGAGTTTTTAGAGCAAGGGAAATTGTTAGAGAACAGCTACAGGCAGATGGTTACCTCAATCCTCCAGTCCCAAAATCTTCTTCACATTCTCCTTAA
PROTEIN sequence
Length: 184
MLTETFSGRRPEGYERVEELRPFVYNFARKLTGDPVLAEDIAQEALISAWRSYDSIRTANLKSWLGSIVLNKVRQYNRVKKNKVSTVEISPNLADGFDLESTIEKHTTLNTISRAVDALPLDYRVPLLLWMDDVPFEEIAKFYGLKNPTAKTRVFRAREIVREQLQADGYLNPPVPKSSSHSP*