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bjp_ig2069_scaffold_148_36

Organism: BJP_Ig2069_Hor_194_2014_Rhodocyclales_62_24_partial

partial RP 36 / 55 BSCG 37 / 51 ASCG 11 / 38 MC: 1
Location: 30164..33622

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1223802 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 999.99
  • Bit_score: 1790
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYJ2_AROAE similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 999.99
  • Bit_score: 1569
  • Evalue 0.0
  • rbh
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 999.99
  • Bit_score: 1790
  • Evalue 0.0

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Taxonomy

Sulfuritalea hydrogenivorans → Sulfuritalea → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3459
GTGCCGCTGCCTGAAATCCTTCCGTTGAATCCCCTGCCGTCGCTGTCCGCCCGCCCCAAGCCGGGGCAACGCCTCGATTTGCCGCCGCTGCTCGTCTCTGCCGATGCGTTGGCCATCGCCCGGTTGGCCGTAGCGGACCAGTGTCTGGCCGTCATCACCGCCGGCCCCCTCGAAGCCCAGCGGCTGGCCGAGGAAATCGCCTGGTTCGCGCCTGCCTTGCGCGTACATCTCCTGCCCGACTGGGAGACCCTGCCTTATGACGGCTTCTCGCCGCACCAGGACCTGATCTCCGAACGGCTGGCGACGCTCCATGCGGTCAGCCACGGCCAATGCGACGTGCTGATCGCCGCCGCCGCGACGGCGGTCGGCCGGCTCGCGCCGGTGAGTTTTCTGGCCGGTCACACCTTCTTCATGAAAAAGGGCGAGCGGCTTGATCTCGACCAGCTCCGCGCCCAGCTTGGCCGTGCCGGCTACCAGCATGTCACGCAGGTCGTCGCCGCCGGCGAATACAGCGTGCGCGGCGGCCTGATCGACCTGTTTCCGATGGGCGTCGCCTTGCCCTACCGCATCGAACTGTTCGATGCCGAGATCGAGACCATCCGCTGTTTCGACGCAGACACCCAGCGCACGCTCTACCCGGTGGGCGAAATTCGCCTGCTGCCGGCACGCGAGTTTCCGGTCGGCGAAGCCGGCCGCACCACCTTCCGCCAGCGCTTCCGCGAAGCCTTCGAAGGCGATGCCTCGCGCATCGCGCTGTACAAGGATGTCTCGGGCGGCATCCTGCCCGCCGGGATCGAGTATTACCTGCCGTTGTTTTTCGAGCAGACCGCGACCCTGTTCGACTACCTGCCGGCCAGCACCAGCCTGGTGCTGCACGGCGAGGTCAATGCCGCGATCGAGGAATTCCGGAACGACACGAGCAGCCGTTATCAGCGCCTGGCCGGCGACCGTTCGCGTCCGGTATTGCCGCCGGCCGGGTTGTTCCTGCACGCCGAGGAATTTTTCGTCGCCGCCAAGGCATTCCCGCAGTTTGCGATAAAAGTCGGCGCTGGCGATACGGCGGATTTACCGTTCGCCCGATTGCCGCCGCTCGCCGTTGAGCGCAAGGCCGCCGATCCGCTGCTCCTGCTGCGCCGGTTCCTCGCCACCCATGCCGGCCGCGTGCTGCTGCTCGCCGAATCCGCGGGGCGGCGTGAAACCCTCGCCGGTTTCCTCGCCGAATACGGGCTCAAACCCGCATCATGCAGCGACTTCGCGGCCTTCCGCGGCGCCGGCGAAGATTTCATGCTCGGCGTCGGACCGCTGTCGGGCGGCTTCATCGCCGGCGAGCTGGCGATCGTCACCGAGAACGAACTGTATGCCACCACCGCCCGTCCGCGCGGGCGGCGCAGCGAAGCCCGGCGCGCCAACCTGGAAGGCTGGCTGCGCGACCTGTCGGAGCTGAAGATCGGCGACCCGGTAGTGCATGAGCAGCACGGCATCGGCCGCTATCGCGGCCTGGTCCATCTGGATACGGAAGGCAGTACCGGCCAGGCAAGCAATGAATTCCTGCAGATCGACTATGCCAACGATGCCAGGCTGTATGTGCCGGTTGCCCAACTCGGCCTGATCTCCCGCTACAGCGGCGCCGATCCCGACGCCGTACCGTTGCACGCCCTCGGCTCGGGCCAGTGGGAAAAGGCCAGGAAAAAAGCCGCCGAGCAGGTGCGCGACACCGCCGCCGAGCTGCTCCACCTCCATGCGCTGCGCGCCGCGCGCGAGGGTCATCGCTTCGAGTTCAAGCCGCATGACCTGGAGGCCTTCGCCGATGGCTTCGGCTTCGAGGAAACGCCCGACCAACTCGCGGCGATCGAGGCAGTGATCGCCGACATGGCCTCCGGCAAGCCGATGGATCGCCTGGTCTGCGGCGATGTCGGTTTCGGCAAGACCGAAGTGGCGTTGCGCGCGGCCTTCGTCGCCATCGCCGATGGCAAGCAGGTGGCCGTGCTCTGTCCGACCACGCTGCTGGCCGAACAGCACTACCAGAACTTTGCCGACCGCTTCGCCAACTGGCCGGTCAGGGTGGCGGAAATCTCGCGCTTCAAATCGGCGCGCGAGCAGGCCGAGGCCATCGAGCAGGTCGCGCAAGGCGCGATCGACATCCTGATCGGCACTCACCGCCTGTTGCAAAAGGACGTCCGCTTCAAGCGTCTCGGGCTGGCCATCATCGACGAAGAACACCGCTTCGGCGTGCGCCAGAAGGAAGCCCTGAAGCGCCTGCGCGCCGAGATCGACATCCTGACCCTGACCGCGACGCCGATTCCGCGCACGCTGGGACTCTCGCTCGAAGGCCTCCGCGATTTTTCGGTGATCGCCACCCCGCCTTCGAGGCGGCTGGCGATCAAGACCTTCGTCGCCGCCTGGTCGAGCGGGCTGATCCGCGAAGCTTGCTTACGCGAATTCAAGCGCGGCGGCCAGGTGTATTTCCTGCACAACGAGGTCGACACCATCGAGAACATGAAGGAGCGCCTGGCCACGCTGCTGCCCGAGGCGAAGATCGTCGTCGGCCACGGCCAGTTGCCCGAGCGCGAACTGGAGCGCGTGATGCGCGAGTTCACCCAGCAGAAGCACAACCTGCTGCTGTGCTCGACCATCATCGAGACCGGGATCGACAATCCGCATGCCAATACCATCATCATCAATCGCGCCGACAAGTTCGGCCTGGCGCAATTGCACCAGTTGAGGGGCCGCGTCGGCCGCAGTCACCACCAGGCCTACGCCTTTCTGCTCACCGCCGCCGACGCCAAACCAAGCCGCGATGCCCAGCGCCGGCTGGAGGCGATCCTGGCGATGGAAGAACTCGGCTCGGGCTTCTTCCTCGCCATGCACGACCTGGAGATTCGCGGCGCCGGCGAGGTATTGGGCGAGAACCAGAGCGGCGAGATTCACGAGATCGGCTTCGCCCTCTACACCAGCATGCTCGATACCGCCGTCAAGGCATTGAAGGAAGGCAGGACGATCCCCGACCTGACCCAGCCGCTGTCGATCACCGCCGAAATCAACCTGCATGTGCCGGCACTCCTGCCCGACAGTTACTGCCCCGACGTCCATGAACGGCTCACGCTCTACAAGCGGCTGGCCAGCTGCGACGACGATGAGGCGCTCACCGCCGTGCAGGAAGAACTGATCGACCGCTACGGCGAGCTGCCCGCCCAGGCCCGGACGCTGCTCGAAGTGCATCGCCTGCGCCTGCTCTGCAAGTCGCGCGGCATCGCCCGGCTCGACGCCGGAACGGCCGCGATACAATTGCACTTCATGCCGCAGCCGCCGATCGACCCCGCGCGGATCATTCGCCTGATCCAGAGCGACCGCGATTTCAAGCTTGCCGGCCCGGACAAGCTGCTCTGGAAAAAAACCACGGCCGATCTTGCCCAGCGCCTGCACGCCGTGCGCGAACTGCTGAAGAAATTGCACCCATGA
PROTEIN sequence
Length: 1153
VPLPEILPLNPLPSLSARPKPGQRLDLPPLLVSADALAIARLAVADQCLAVITAGPLEAQRLAEEIAWFAPALRVHLLPDWETLPYDGFSPHQDLISERLATLHAVSHGQCDVLIAAAATAVGRLAPVSFLAGHTFFMKKGERLDLDQLRAQLGRAGYQHVTQVVAAGEYSVRGGLIDLFPMGVALPYRIELFDAEIETIRCFDADTQRTLYPVGEIRLLPAREFPVGEAGRTTFRQRFREAFEGDASRIALYKDVSGGILPAGIEYYLPLFFEQTATLFDYLPASTSLVLHGEVNAAIEEFRNDTSSRYQRLAGDRSRPVLPPAGLFLHAEEFFVAAKAFPQFAIKVGAGDTADLPFARLPPLAVERKAADPLLLLRRFLATHAGRVLLLAESAGRRETLAGFLAEYGLKPASCSDFAAFRGAGEDFMLGVGPLSGGFIAGELAIVTENELYATTARPRGRRSEARRANLEGWLRDLSELKIGDPVVHEQHGIGRYRGLVHLDTEGSTGQASNEFLQIDYANDARLYVPVAQLGLISRYSGADPDAVPLHALGSGQWEKARKKAAEQVRDTAAELLHLHALRAAREGHRFEFKPHDLEAFADGFGFEETPDQLAAIEAVIADMASGKPMDRLVCGDVGFGKTEVALRAAFVAIADGKQVAVLCPTTLLAEQHYQNFADRFANWPVRVAEISRFKSAREQAEAIEQVAQGAIDILIGTHRLLQKDVRFKRLGLAIIDEEHRFGVRQKEALKRLRAEIDILTLTATPIPRTLGLSLEGLRDFSVIATPPSRRLAIKTFVAAWSSGLIREACLREFKRGGQVYFLHNEVDTIENMKERLATLLPEAKIVVGHGQLPERELERVMREFTQQKHNLLLCSTIIETGIDNPHANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAFLLTAADAKPSRDAQRRLEAILAMEELGSGFFLAMHDLEIRGAGEVLGENQSGEIHEIGFALYTSMLDTAVKALKEGRTIPDLTQPLSITAEINLHVPALLPDSYCPDVHERLTLYKRLASCDDDEALTAVQEELIDRYGELPAQARTLLEVHRLRLLCKSRGIARLDAGTAAIQLHFMPQPPIDPARIIRLIQSDRDFKLAGPDKLLWKKTTADLAQRLHAVRELLKKLHP*