ggKbase home page

rifcsplowo2_01_scaffold_9841_14

Organism: RIFCSPLOWO2_01_FULL_Woesearchaeota_35_30

partial RP 33 / 55 MC: 6 BSCG 7 / 51 ASCG 25 / 38 MC: 3
Location: 8949..9518

Top 3 Functional Annotations

Value Algorithm Source
TATA-box-binding protein id=5800078 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 177.0
  • Bit_score: 274
  • Evalue 8.60e-71
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 177.0
  • Bit_score: 274
  • Evalue 1.20e-70
TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 176.0
  • Bit_score: 239
  • Evalue 6.60e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR15 → Archaea

Sequences

DNA sequence
Length: 570
ATGGTAAAAAACACAAAAAGTACTGCAAAAAAAGAGATTAAAATAGTAAATATAGTAGTTTCGACTGCTTTGGAAAAAGATGTTCCTTTAGAAAAGATGGCTGCTACCCTTCCAAATACCGAGTATAATCCAGAACAGTTTCCCGGTCTTGTCCTTAGGATAAAAGATCCTAAAACTTCTGCTTTAGTCTTCTCTAGTGGAAAAGTGGTGTGTACTGGCGCCAGAACCATGGAAGAAGTGGATCGAAGCATTCAAAGTATCATCAAAAGTCTTAAAAAAATGAATATCCACGTAACTATCAAGCCAATAATAACTGTGCAAAATATAGTTGCTTCTGGAAGTATAGGAATGGATCTTAATCTAAACGTATTGGGTATAAAGTTGCCCCATACCGAATACGAACCAGAACAATTTCCTGGTTTAGTACATAAATTGAAAGGTACTAATGCTACTTTCCTCTTATTTAGTAATGGTAAGATAGTATGTACTGGAACTAAGACGGAACAGGAAGTCAATGATGCGACGGATAAGCTCATCGAGAACTTAAAGAAAGTCTTGGGAAAGAAGTAA
PROTEIN sequence
Length: 190
MVKNTKSTAKKEIKIVNIVVSTALEKDVPLEKMAATLPNTEYNPEQFPGLVLRIKDPKTSALVFSSGKVVCTGARTMEEVDRSIQSIIKSLKKMNIHVTIKPIITVQNIVASGSIGMDLNLNVLGIKLPHTEYEPEQFPGLVHKLKGTNATFLLFSNGKIVCTGTKTEQEVNDATDKLIENLKKVLGKK*