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rifcsplowo2_01_scaffold_1879_28

Organism: RIFCSPLOWO2_01_FULL_Woesearchaeota_44_20

near complete RP 34 / 55 MC: 3 BSCG 6 / 51 ASCG 34 / 38 MC: 2
Location: 29337..29885

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=644281 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 178.0
  • Bit_score: 128
  • Evalue 1.30e-26
2'-5' RNA ligase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S8P6_METSF similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 178.0
  • Bit_score: 128
  • Evalue 9.60e-27
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 178.0
  • Bit_score: 128
  • Evalue 2.70e-27

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Taxonomy

Methanocaldococcus sp. FS406-22 → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 549
ATGAAGCGGCTGTTTGTGGGAATCTCTCTTCCAGGAGATGTGAAAGAGAAGATTGCCGTTTTTTCTCATAAAGTAAAAGAAACAGAAGGAGAATTTCGTTTTGTTTCAGCGGAGAATCTTCACATCACTCTTTCTTTTTGGGGAGATGTTGAGGAGGGGAATATTAGTTTTGTCGTGGAAAAATTAACTTCTGTATTGGCCCATCACGGAACGGTCAAAATCGATGCTATCGGCGGCGGCGTTTTTCCCACCGCGGGGAGAATCAATGTGGTCTGGGTAGGATTAAAGAATGGGGCGCTAACAGATTTGATCAAAAAGATCAATGCAACTCTATCAATCAATGCCGGCCACGAAGAGGAAACCCCTCACGTGACCATAGCTCGGGTGAAATCGGGAAAGAATAAAGAGAAAATCAGAGAAGTCGTGGAACGGTTCAAACATTTTGACTTTGGCACGTTTGTAGCGGACAGGATTACTTTGTACGAAAGTAAATTGACTTCCGCGGGGCCGGTCTATCATATTGTGAAAGAGGTCGGATTGGTCAAATAG
PROTEIN sequence
Length: 183
MKRLFVGISLPGDVKEKIAVFSHKVKETEGEFRFVSAENLHITLSFWGDVEEGNISFVVEKLTSVLAHHGTVKIDAIGGGVFPTAGRINVVWVGLKNGALTDLIKKINATLSINAGHEEETPHVTIARVKSGKNKEKIREVVERFKHFDFGTFVADRITLYESKLTSAGPVYHIVKEVGLVK*