ggKbase home page

rifcsplowo2_01_scaffold_101904_1

Organism: RIFCSPLOWO2_01_FULL_Pacearchaeota_32_14

partial RP 27 / 55 MC: 6 BSCG 15 / 51 ASCG 23 / 38 MC: 2
Location: comp(1..447)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 149.0
  • Bit_score: 232
  • Evalue 5.40e-58
Base excision DNA repair protein, HhH-GPD family n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 id=5103570 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 143.0
  • Bit_score: 137
  • Evalue 1.30e-29
Base excision DNA repair protein, HhH-GPD family similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 143.0
  • Bit_score: 137
  • Evalue 3.70e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 447
ATGGACAAAAAGAAATATTTTTTAGAGATTTTTAGAAAGGCTGAAAAAAAATATGGGAAGAAGGAGAAAAGACTTGCTGGAGAAGAATGGGAACATGATTGGCAGACACTTATTGCGACAATAATGAGTGCACAATCGAGAGATGAAACAACAATTCCTATTGCTGAAGAGTTATTTAGAAGATATAAAACTCTTGATGAACTTGGAAATGCGAAGTTTAGTGATGTTCTGAAAATATTTAGAAGTTTAAATTATAATAGAACTAAGGCAAAAAATGTTATTGCTGCGGCTAAGTATATTATAGAATATTTTAATTATAAAATTTCAGATGATATTGATAAATTGATTGAAATTCCTGGAGTCGGAAGGAAGACAGCTAATCTTGTTATAACTGAGTGTCACGAAATAGATGGAATTACTGTAGACACGCATGTACACAGGATAAGT
PROTEIN sequence
Length: 149
MDKKKYFLEIFRKAEKKYGKKEKRLAGEEWEHDWQTLIATIMSAQSRDETTIPIAEELFRRYKTLDELGNAKFSDVLKIFRSLNYNRTKAKNVIAAAKYIIEYFNYKISDDIDKLIEIPGVGRKTANLVITECHEIDGITVDTHVHRIS