ggKbase home page

CARSE4PL_8_4

Organism: Staphylococcus epidermidis strain 4 plasmids

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 4309..4677

Top 3 Functional Annotations

Value Algorithm Source
putative cadmium efflux system accessory protein similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 122.0
  • Bit_score: 239
  • Evalue 4.30e-61
HTH_ARSR_1 (db=PatternScan db_id=PS00846 from=58 to=76 evalue=0.0 interpro_id=IPR018334 interpro_description=Transcription regulator ArsR, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
HTH_ARSR_2 (db=ProfileScan db_id=PS50987 from=24 to=119 evalue=0.0 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGAAAAAAAAAGATACTTGTGAAATTTTTTGTTATGACGAAGAAAAGGTTAATCGAATACAAGGGGATTTACAAACAGTTGATATTTCTGGTGTTAGCCAAATGTTAAAGGCTATTGCCGATGAAAATAGAGCAAAAATTACTTACGCTCTGTGTCAGGATGAAGAGTTGTGTGTTTGTGATATAGCAAATATCTTAGGTGTTACGATAGCAAATGCATCTCATCATTTACGTATGCTTTATAAGCAAGGGGTGGTCAACTTTAGAAAAGAAGGAAAACTAGCTTTATATTCTTTAGATGATGAACATATCGGGCAGATAATGATGATCGCCCTAGCACATAAGAAAGAAGTGAAGGTCAATGTCTGA
PROTEIN sequence
Length: 123
MKKKDTCEIFCYDEEKVNRIQGDLQTVDISGVSQMLKAIADENRAKITYALCQDEELCVCDIANILGVTIANASHHLRMLYKQGVVNFRKEGKLALYSLDDEHIGQIMMIALAHKKEVKVNV*