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rifcsplowo2_01_scaffold_46200_3

Organism: RIFCSPLOWO2_01_FULL_Archaea_35_10b

near complete RP 34 / 55 MC: 4 BSCG 9 / 51 ASCG 32 / 38 MC: 1
Location: 2772..3956

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CG_Micra_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 401.0
  • Bit_score: 354
  • Evalue 1.90e-94
tRNA pseudouridine synthase D TruD n=1 Tax=mine drainage metagenome RepID=T1ARP7_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 404.0
  • Bit_score: 304
  • Evalue 1.20e-79
  • rbh
tRNA pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 428.0
  • Bit_score: 262
  • Evalue 2.60e-67

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Taxonomy

CG_Micra_01 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 1185
ATGGAATATTCTTACTTATCTAAAACCTCAGGAATTGGTGGCACCCTCAAGAATGAACCTGAAGATTTTGTAGTAGAAGAGATAACGACTGACGGAACAGTTCTTGAATTAGACAAAAAAATAGATTTGCATGGAGTGGGTGACTTTACTCATTTTGTTCTACAAAAAGCTGATTGGTCAACCTCTGCAGCCATAAAGAGAATTGCGAAAGCATTAAAATCAGGCCATAAAAGATTCAGTTTTGCTGGAACCAAAGACAAAGTTGCATTGACGACCCAGCTTGTTTCATGCTTTGGAAAATCGCCAGAAGAATTTCTTAATCTAGATCTTAAAGACATTAAAATACTCGGTGCGTGGAGATCAAATGAAAAAATAACCCTTGGTGACCTCTTAGGAAATAGGTTTTGTATTAGAGTTGTTGATTCTAGCGAATCAGTTGAAAAGGTAACAAAGATATTTACTGAATTAAATGAGAAGTTTCCAAATTATTTTGGCCCTCAAAGATTTGGTTCGACGCGACAAAATACCCATCTAATTGGAGAGAAACTCATTCGCAATCAGGTAGAAGATGCGGCAATGATTTTTTTGTGTGATTATAAAGGAGAAGAACATGAAATTGCAAAGCAAGCTAGGATTGAATTAAAAGAAAGTGAAAATTTTTCTCAAGCACTTAAATTTTTTCCAAAGCATCTTCATTTAGAAAGAAGCATGCTTGACACACTTGCAAAAAATTCAAATAACTTTGCGAGTGCTTTTAGGAAACTGCCAAGAACTATTTTACTTCTATTTGTTCATGCCTTCCAAAGTCATTTATTTAATCATCTCCTTTCCAAGAGAATTGCTGAAGGAGATCTAGAACTTGAAGAAGGAGAGTATTTTTGTGGTGAAGATTCCTTTGGTTTTCCTGATTTGGGTAAAAAAGAGAAACAAGGTTGGCTTGGTGGAAAAATAATTGGATATGAAACAACCCTAAATAAACGTGAAAAAGAGTTATTGGAAGAATACAAAATAGAAAAGGAAAGTTTCAAAGTAAGGAGTTTGCCTGAAATCAGTTCTAAAGGGACATATAGGACTTTATTGGCACCTTTAAAAGGCTTTAATTTTTCCAATTGCACATTCTCATTCTTGTTGCCTTCTGGTTCTTATGCAACTTCTGCTTTAAGGGAATTCTTAGATGCCAAGTAA
PROTEIN sequence
Length: 395
MEYSYLSKTSGIGGTLKNEPEDFVVEEITTDGTVLELDKKIDLHGVGDFTHFVLQKADWSTSAAIKRIAKALKSGHKRFSFAGTKDKVALTTQLVSCFGKSPEEFLNLDLKDIKILGAWRSNEKITLGDLLGNRFCIRVVDSSESVEKVTKIFTELNEKFPNYFGPQRFGSTRQNTHLIGEKLIRNQVEDAAMIFLCDYKGEEHEIAKQARIELKESENFSQALKFFPKHLHLERSMLDTLAKNSNNFASAFRKLPRTILLLFVHAFQSHLFNHLLSKRIAEGDLELEEGEYFCGEDSFGFPDLGKKEKQGWLGGKIIGYETTLNKREKELLEEYKIEKESFKVRSLPEISSKGTYRTLLAPLKGFNFSNCTFSFLLPSGSYATSALREFLDAK*