ggKbase home page

rifcsplowo2_01_scaffold_9299_9

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_45_21

partial RP 36 / 55 MC: 5 BSCG 6 / 51 ASCG 30 / 38 MC: 2
Location: comp(8634..8861)

Top 3 Functional Annotations

Value Algorithm Source
snRNP Sm-like protein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Woesearchaeota_36_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 70.0
  • Bit_score: 113
  • Evalue 1.10e-22
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 69.0
  • Bit_score: 109
  • Evalue 1.90e-21
Like-Sm ribonucleoprotein core similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 69.0
  • Bit_score: 108
  • Evalue 9.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Woesearchaeota_36_6_curated → Woesearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 228
ATGAGAATGGAAGCAAGACCTTTAGATGCATTGAATCGTGCTCGTGATAAGAAAGTTATTGTCGAATGCAAGAACAACCGCCAGTATGTTGGTACGTTGCGTGCGTTTGACATTCACATTAATGTTGTCCTAGACGAGACTGAAGAGCGTGTTGATGGGGAAATCAAGCGCAAGATGGGAACCGCGTTTATTCGCGGAGATACCATTGTGCTGATTAGTCCGGCGTAA
PROTEIN sequence
Length: 76
MRMEARPLDALNRARDKKVIVECKNNRQYVGTLRAFDIHINVVLDETEERVDGEIKRKMGTAFIRGDTIVLISPA*