ggKbase home page

rifcsplowo2_01_scaffold_26382_4

Organism: RIFCSPLOWO2_01_FULL_Archaea_Pacearchaeota_32_9

partial RP 26 / 55 MC: 2 BSCG 5 / 51 ASCG 17 / 38 MC: 1
Location: comp(788..1372)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-intron endonuclease; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Pacearch_05 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 193.0
  • Bit_score: 242
  • Evalue 4.00e-61
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FB5D0 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 177.0
  • Bit_score: 203
  • Evalue 1.90e-49
tRNA-intron endonuclease similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 190.0
  • Bit_score: 201
  • Evalue 2.10e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_05 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 585
ATGGTGAAGAAAAAACAAGCTAAAAAGCCCTTAAAAACAAAGGAACGGGGAAAAGAAAAAAGTAGATATAAAGCATTTAAGGCGATTTTTAGCGGCGAGGAAATACTAAGCAGCGCTAAAGAAGCGCGAGATTTATACAGCCAGAGCAATTTTGGAGAGTATATTAATGGCAAGATACATTATTCGCTTGCTGAAGCACTTTATTTGATTGACAGAGGCAAGATAGAGGTATATGCTAAGAGCAAGAAGCTCAAATTTAATGATTTAATGGAAATGTGCAAGAAGATTGACAGCAAGATTTTGGTTAAATCTATTGTTTACAAGGATTTAAGAAATAGGGGCTATTTGCTTAAGACTGCTTTAAAGTTTGGAGCAGATTTTAGGGTTTATGACAAGGGGAAAAAACCTGGAAAAGAGCACGCCAAGTGGCTGTTGTTTTGCGTTAGTGAGAGTGCTGATCTAACATGGCAGGATTTTTCTGCAAAGAACAGGGTAGCACATTCAACAAATAAAAGCCTGCTTGTGGCGGTTGTAGACCATGAAGGAGATGTTATTTATTATGACATTAACTGGATAAGGCCTTAG
PROTEIN sequence
Length: 195
MVKKKQAKKPLKTKERGKEKSRYKAFKAIFSGEEILSSAKEARDLYSQSNFGEYINGKIHYSLAEALYLIDRGKIEVYAKSKKLKFNDLMEMCKKIDSKILVKSIVYKDLRNRGYLLKTALKFGADFRVYDKGKKPGKEHAKWLLFCVSESADLTWQDFSAKNRVAHSTNKSLLVAVVDHEGDVIYYDINWIRP*